Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 YPEL5P2-201ENST00000605553 359 ntBASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXD4L1Q9NU39 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 SNORA8-201ENST00000384574 139 ntBASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 MIR605-201ENST00000385078 83 ntBASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 AC079355.1-201ENST00000421770 223 ntBASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 RN7SL214P-201ENST00000487317 265 ntBASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 MIR7157-201ENST00000635801 60 ntBASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 U6.108-201ENST00000637764 58 ntBASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 AL049767.1-202ENST00000637826 242 ntBASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXD4L1Q9NU39 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
FOXD4L1Q9NU39 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
FOXD4L1Q9NU39 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.84□□□□□ -1.48
FOXD4L1Q9NU39 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
FOXD4L1Q9NU39 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 Y_RNA.299-201ENST00000364973 94 ntBASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 MIR218-1-201ENST00000384999 110 ntBASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 CYP2C59P-201ENST00000457790 269 ntBASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 AC108751.2-201ENST00000469993 231 ntBASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXD4L1Q9NU39 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 Y_RNA.190-201ENST00000363964 101 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 Y_RNA.426-201ENST00000384068 113 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 SNORD96B-201ENST00000386148 79 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 FO393413.1-201ENST00000402892 195 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 CHEK2P5-201ENST00000423877 246 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 RPS29P9-201ENST00000440360 171 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 RPL34P20-201ENST00000442771 351 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 MIR4777-201ENST00000583710 86 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 AL353149.1-201ENST00000610667 244 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 AL022401.1-201ENST00000619498 108 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 MIR4662A-201ENST00000637499 67 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 NEAT1-202ENST00000501122 22743 ntBASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXD4L1Q9NU39 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 SNORD113.2-201ENST00000364166 89 ntBASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 SNORD115-35-201ENST00000365122 82 ntBASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 SNORA80E-201ENST00000384744 137 ntBASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 RNU6-887P-201ENST00000410660 100 ntBASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 AL512326.2-201ENST00000426359 151 ntBASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 Y_RNA.659-201ENST00000515994 113 ntBASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 RNA5SP362-201ENST00000516048 118 ntBASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 RNA5SP464-201ENST00000516251 108 ntBASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 SCARNA3-201ENST00000517097 143 ntBASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 AC211433.2-201ENST00000608433 387 ntBASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
FOXD4L1Q9NU39 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 MIR515-2-201ENST00000384883 83 ntBASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 MIR515-1-201ENST00000384884 83 ntBASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 AL109933.2-201ENST00000452651 260 ntBASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 AC231760.1-201ENST00000498002 260 ntBASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 AC007448.1-201ENST00000582714 234 ntBASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 MIR6826-201ENST00000617808 98 ntBASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXD4L1Q9NU39 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.79□□□□□ -1.48
FOXD4L1Q9NU39 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms