Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC092991.1-201ENST00000477176 376 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.5□□□□□ -1.85
SSU72Q9NP77 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.5□□□□□ -1.85
SSU72Q9NP77 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
SSU72Q9NP77 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.5□□□□□ -1.85
SSU72Q9NP77 SNORA64.4-201ENST00000516632 81 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.5□□□□□ -1.85
SSU72Q9NP77 MIR3186-201ENST00000577404 85 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.5□□□□□ -1.85
SSU72Q9NP77 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SSU72Q9NP77 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSU72Q9NP77 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSU72Q9NP77 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.5□□□□□ -1.85
SSU72Q9NP77 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSU72Q9NP77 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSU72Q9NP77 AC026241.1-201ENST00000517873 2142 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 RNU6-407P-201ENST00000365280 104 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 MIR586-201ENST00000385035 97 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SSU72Q9NP77 AL139095.1-201ENST00000404326 391 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 AL355796.1-201ENST00000406706 323 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 RNU6-383P-201ENST00000410864 94 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 AC006461.1-201ENST00000412637 326 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.49□□□□□ -1.85
SSU72Q9NP77 RNU6-1211P-201ENST00000459179 105 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 AL133162.1-201ENST00000463228 453 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 AC068657.1-201ENST00000520807 306 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 AC112693.2-201ENST00000556538 232 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 AC087499.8-201ENST00000578406 226 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 MIR5047-201ENST00000579212 100 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 LARP7P3-201ENST00000579888 337 ntBASIC3.49□□□□□ -1.85
SSU72Q9NP77 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.49□□□□□ -1.85
SSU72Q9NP77 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SSU72Q9NP77 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSU72Q9NP77 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSU72Q9NP77 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSU72Q9NP77 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSU72Q9NP77 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSU72Q9NP77 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSU72Q9NP77 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSU72Q9NP77 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSU72Q9NP77 RNU6-1305P-201ENST00000364353 104 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 SNORA51.4-201ENST00000364993 124 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 RNU6-643P-201ENST00000384018 107 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 RNU6-44P-201ENST00000384045 107 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 MIR15B-201ENST00000385045 98 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 AL606845.1-201ENST00000404881 255 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 MIR1278-201ENST00000408753 81 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 AL121914.1-201ENST00000450188 156 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 HMGN2P9-201ENST00000476875 229 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 RPL36AP48-201ENST00000485521 314 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 RNU6-1098P-201ENST00000516772 96 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.48□□□□□ -1.85
SSU72Q9NP77 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.48□□□□□ -1.85
SSU72Q9NP77 AL021368.2-201ENST00000606125 5352 ntBASIC3.48□□□□□ -1.85
SSU72Q9NP77 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSU72Q9NP77 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSU72Q9NP77 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSU72Q9NP77 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSU72Q9NP77 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSU72Q9NP77 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.47□□□□□ -1.85
SSU72Q9NP77 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 SNORD56.3-201ENST00000363507 71 ntBASIC3.47□□□□□ -1.85
SSU72Q9NP77 RNU6-768P-201ENST00000384683 107 ntBASIC3.47□□□□□ -1.85
SSU72Q9NP77 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 RNU6-1228P-201ENST00000391014 107 ntBASIC3.47□□□□□ -1.85
SSU72Q9NP77 AL139247.1-201ENST00000422768 325 ntBASIC3.47□□□□□ -1.85
SSU72Q9NP77 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 YME1L1P1-201ENST00000429435 297 ntBASIC3.47□□□□□ -1.85
SSU72Q9NP77 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 PHBP14-201ENST00000512887 367 ntBASIC3.47□□□□□ -1.85
SSU72Q9NP77 SNORA31.9-201ENST00000516429 84 ntBASIC3.47□□□□□ -1.85
SSU72Q9NP77 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 MIR3939-201ENST00000582614 106 ntBASIC3.47□□□□□ -1.85
SSU72Q9NP77 AF117829.1-206ENST00000621883 3802 ntBASIC3.47□□□□□ -1.85
SSU72Q9NP77 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSU72Q9NP77 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSU72Q9NP77 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.47□□□□□ -1.85
SSU72Q9NP77 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSU72Q9NP77 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSU72Q9NP77 AL356274.2-201ENST00000624379 3752 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.46□□□□□ -1.86
SSU72Q9NP77 SNORD114-7-201ENST00000362520 77 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 RNU6-144P-201ENST00000383951 107 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 SNORD116-13-201ENST00000384408 92 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 AL139281.1-201ENST00000422120 335 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 EIF4EP4-201ENST00000424916 578 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 RPL18P10-201ENST00000425606 538 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 AC017083.1-201ENST00000428093 483 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 RPL23AP58-201ENST00000440453 469 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 SRIP1-201ENST00000489235 288 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 AC117454.1-201ENST00000491120 168 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms