Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 Y_RNA.99-201ENST00000363138 105 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 Y_RNA.134-201ENST00000363435 105 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 RNA5SP500-201ENST00000364486 119 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 RNU6-392P-201ENST00000364926 101 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 DEFA7P-201ENST00000382676 285 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 MIR758-201ENST00000390227 88 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 RPL36P1-201ENST00000419720 225 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 HBG2-204ENST00000444587 307 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 AC092967.1-201ENST00000449016 481 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 RPS29P33-201ENST00000456717 146 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 MIR4480-201ENST00000582492 71 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 CU639417.4-201ENST00000623928 207 ntBASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-11Q9BYQ6 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 AC011504.1-201ENST00000623331 4103 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 AC010733.2-201ENST00000589496 5702 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 RNA5SP375-201ENST00000362975 119 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 U8.4-201ENST00000363626 134 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 RNU1-32P-201ENST00000363937 159 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 Y_RNA.321-201ENST00000365149 102 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 RNU6-198P-201ENST00000384258 104 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 SNORD115.2-201ENST00000391126 59 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 SNORA11F-201ENST00000408237 128 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 RN7SKP281-201ENST00000410472 352 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 SNORD63.2-201ENST00000516303 64 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 MIR4776-2-201ENST00000580204 80 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 AP000942.3-201ENST00000603702 160 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 AC012493.3-201ENST00000604494 112 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 RN7SL722P-201ENST00000617780 284 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 RN7SL565P-201ENST00000618246 284 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 MTRNR2L9-201ENST00000622562 75 ntBASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-11Q9BYQ6 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-11Q9BYQ6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms