Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.3□□□□□ -1.88
SMC1BQ8NDV3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.3□□□□□ -1.88
SMC1BQ8NDV3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.3□□□□□ -1.88
SMC1BQ8NDV3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 RNU6-463P-201ENST00000384340 107 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 EIF4EP4-201ENST00000424916 578 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 SDAD1P3-201ENST00000427380 333 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 EIF1P2-201ENST00000428233 350 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 MTCYBP9-201ENST00000431021 303 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 RPS15AP7-201ENST00000439294 405 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 AC010655.3-201ENST00000478818 450 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 MIR5695-201ENST00000579717 85 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 AL356575.1-201ENST00000603008 283 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 7SK.10-201ENST00000621414 298 ntBASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.29□□□□□ -1.88
SMC1BQ8NDV3 AC093831.2-201ENST00000624393 3427 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 Y_RNA.47-201ENST00000362697 108 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 U8.9-201ENST00000365667 134 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 RNU6-708P-201ENST00000384217 107 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 Y_RNA.574-201ENST00000384766 95 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 SNORD78.2-201ENST00000391076 69 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 WARS2P1-201ENST00000429678 537 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 AC096638.1-201ENST00000444678 216 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 SNORA40.15-201ENST00000516884 107 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 MIR7515-201ENST00000637837 67 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 AC010329.5-201ENST00000623497 2174 ntBASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SMC1BQ8NDV3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 SNORD114-1-201ENST00000362705 72 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 RNU6-1301P-201ENST00000362724 104 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 Y_RNA.269-201ENST00000364685 89 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 Y_RNA.276-201ENST00000364732 109 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 MIR487A-201ENST00000385009 80 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 MIR10B-201ENST00000385011 110 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 AL356320.1-201ENST00000429616 163 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 RN7SL75P-201ENST00000461926 281 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 AC007215.1-201ENST00000464893 276 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 AC093023.1-201ENST00000547375 507 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 UBL5P4-201ENST00000562584 236 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 RPL30P11-203ENST00000598995 310 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 MIR7157-201ENST00000635801 60 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 AC069528.2-201ENST00000624849 1991 ntBASIC3.27□□□□□ -1.89
SMC1BQ8NDV3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 RNU6-238P-201ENST00000363313 106 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 RNU6-1109P-201ENST00000391187 107 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 SNORA26.7-201ENST00000391288 122 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 RNA5SP201-201ENST00000410316 124 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 RPS12P18-201ENST00000442381 270 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 UQCRHP3-201ENST00000451503 251 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 AC145146.1-201ENST00000496370 254 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 RNU6-1143P-201ENST00000516125 104 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 SNRPGP20-201ENST00000604477 205 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 PCGEM1.1-201ENST00000613431 131 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 U6.92-201ENST00000636464 89 ntBASIC3.26□□□□□ -1.89
SMC1BQ8NDV3 BX322639.1-202ENST00000423987 2213 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 ZNF204P-201ENST00000416749 2397 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 RNU4-15P-201ENST00000362613 141 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 U3.9-201ENST00000363823 204 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 RNU6-378P-201ENST00000384324 107 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 RNU6-713P-201ENST00000384761 107 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 AL079342.1-201ENST00000401460 267 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 MICF-203ENST00000432679 129 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 AC112220.1-201ENST00000434628 355 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 RPL21P2-201ENST00000440049 481 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 FCF1P4-201ENST00000448326 183 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 AC073901.1-201ENST00000462471 408 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 EIF4A1P12-201ENST00000551910 141 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 AC090517.1-201ENST00000569307 266 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 RAC1P9-201ENST00000604990 392 ntBASIC3.25□□□□□ -1.89
SMC1BQ8NDV3 Y_RNA.772-201ENST00000606692 102 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms