Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 RPL23AP54-201ENST00000495129 419 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 AC007224.1-201ENST00000564410 144 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 AL360157.1-201ENST00000565962 87 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
DEPDC4Q8N2C3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.9□□□□□ -1.78
DEPDC4Q8N2C3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
DEPDC4Q8N2C3 AL049781.1-201ENST00000623195 3585 ntBASIC3.9□□□□□ -1.78
DEPDC4Q8N2C3 RNA5SP175-201ENST00000364275 119 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-1240P-201ENST00000365155 104 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-117P-201ENST00000365415 107 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-438P-201ENST00000365561 103 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-80P-201ENST00000384195 107 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 RPL30P4-201ENST00000429309 333 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 AC009969.1-201ENST00000438726 172 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 PHBP16-201ENST00000446318 950 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 RPL35AP15-201ENST00000468042 339 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 AC092991.1-201ENST00000477176 376 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 SCARNA3-201ENST00000517097 143 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 AL160236.1-201ENST00000556317 195 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 AC107294.3-201ENST00000609211 526 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 AL021707.8-201ENST00000609428 183 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 AC096577.2-201ENST00000611455 153 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 AC002064.3-201ENST00000623448 346 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 AC112484.5-201ENST00000624189 228 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 AC011944.2-201ENST00000624440 683 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
DEPDC4Q8N2C3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 SNORD45.3-201ENST00000363836 72 ntBASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 RNA5SP509-201ENST00000364577 119 ntBASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 SEM1P1-201ENST00000506694 209 ntBASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-1333P-201ENST00000516162 93 ntBASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 AL359881.1-201ENST00000602916 267 ntBASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 AC079587.1-201ENST00000603846 277 ntBASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.89□□□□□ -1.79
DEPDC4Q8N2C3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 RNA5SP322-201ENST00000363617 119 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 Y_RNA.261-201ENST00000364631 102 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 SNORA72-201ENST00000384339 132 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 RNU1-89P-201ENST00000384592 164 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 SNORA20-201ENST00000384662 132 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-1211P-201ENST00000459179 105 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 AC080013.2-201ENST00000460866 323 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 AC109327.1-201ENST00000471666 403 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 AC105245.1-201ENST00000581934 244 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 AC110741.2-201ENST00000605278 268 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 MIR92B-201ENST00000607575 96 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 AC090115.4-201ENST00000609970 188 ntBASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
DEPDC4Q8N2C3 MFSD8-236ENST00000641509 4050 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 ZNF702P-202ENST00000434269 1966 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 Y_RNA.353-201ENST00000365440 108 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 MIR95-201ENST00000385072 81 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 MIR591-201ENST00000385290 95 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 RPS29P17-201ENST00000430795 166 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 AL353705.1-201ENST00000433468 480 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 AL357134.1-201ENST00000445848 426 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 HMGN2P18-201ENST00000450680 270 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 SNRPGP8-201ENST00000454064 226 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 AC015720.1-201ENST00000565251 277 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 MIR378D2-201ENST00000580636 98 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 VN1R85P-201ENST00000601587 426 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 MIR5739-201ENST00000619803 80 ntBASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.87□□□□□ -1.79
DEPDC4Q8N2C3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms