Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 SNORA25.1-201ENST00000362326 128 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 Y_RNA.65-201ENST00000362846 100 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 Y_RNA.117-201ENST00000363294 101 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 RNU6-514P-201ENST00000384208 107 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 RNU4-70P-201ENST00000384579 139 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 AL139156.1-201ENST00000412785 841 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 EIF4EP4-201ENST00000424916 578 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 RAB28P5-201ENST00000427490 651 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 UBL5P2-201ENST00000583788 219 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 MIR4765-201ENST00000585007 77 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 AC000403.1-201ENST00000613696 3585 ntBASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RUFY4Q6ZNE9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 Y_RNA.200-201ENST00000364018 102 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 MIR29B2-201ENST00000385055 81 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 MIR1289-1-201ENST00000408836 144 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 POLR2KP2-201ENST00000438155 177 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 AC009237.7-201ENST00000447357 229 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 AC092185.1-201ENST00000491371 97 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 RNA5SP380-201ENST00000517190 98 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 AC245166.1-201ENST00000521012 253 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 AC103810.1-201ENST00000579873 453 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 AL033523.1-201ENST00000605153 153 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 SNORD11B-201ENST00000607707 90 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 AC099778.2-201ENST00000610904 211 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 AC110079.1-202ENST00000635213 138 ntBASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RUFY4Q6ZNE9 UBE2WP1-201ENST00000362030 340 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 Y_RNA.29-201ENST00000362570 113 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 RNU6-486P-201ENST00000363116 107 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 Y_RNA.269-201ENST00000364685 89 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 RNU6-1264P-201ENST00000383891 107 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 AC009414.1-201ENST00000427200 443 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 COX6CP14-201ENST00000469580 174 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 AC008885.1-201ENST00000514930 301 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 AC130289.1-201ENST00000577321 73 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 AC008739.2-201ENST00000597006 317 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 AL162424.1-201ENST00000602325 221 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 IGHVIII-44-202ENST00000636235 289 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 MIR3674-201ENST00000636576 68 ntBASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.54□□□□□ -1.84
RUFY4Q6ZNE9 Y_RNA.383-201ENST00000383855 97 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 Y_RNA.446-201ENST00000384178 104 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 SNORA44-201ENST00000384584 132 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 RNA5SP475-201ENST00000410568 110 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 AC027124.2-201ENST00000428249 105 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 Z98742.2-201ENST00000431564 187 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 AC004386.2-201ENST00000441858 148 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 AL138752.1-201ENST00000452964 351 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 SNORA81.3-201ENST00000517283 198 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 AL670379.2-201ENST00000604983 252 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 AC068205.3-201ENST00000636385 468 ntBASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RUFY4Q6ZNE9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 Y_RNA.275-201ENST00000364726 110 ntBASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 SNORA7.4-201ENST00000384249 137 ntBASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 SNORA54-201ENST00000384281 123 ntBASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 MIR549A-201ENST00000385268 96 ntBASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 MICF-203ENST00000432679 129 ntBASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 NDUFB4P10-201ENST00000452541 359 ntBASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 SNORA27.4-201ENST00000516650 95 ntBASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 MIR7106-201ENST00000612419 65 ntBASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 AC004467.1-201ENST00000615678 330 ntBASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 UCA1.1-201ENST00000620952 75 ntBASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RUFY4Q6ZNE9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.51□□□□□ -1.85
RUFY4Q6ZNE9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RUFY4Q6ZNE9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RUFY4Q6ZNE9 SNORA80A-201ENST00000363922 136 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms