Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 Y_RNA.506-201ENST00000384494 102 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 RNU6-125P-201ENST00000384505 107 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 RN7SKP220-201ENST00000410611 288 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 RNU2-49P-201ENST00000410666 184 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 AC009963.1-201ENST00000417265 157 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 AIMP1P2-201ENST00000425294 312 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 RPS29P26-201ENST00000477483 171 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 AC091826.1-201ENST00000514065 313 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 RNU6-1278P-201ENST00000516130 107 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 RNU6-155P-201ENST00000516347 100 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 AC025281.1-201ENST00000567026 265 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 RNU6-529P-201ENST00000363383 104 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 SNORD6-201ENST00000365444 73 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 RNU6-1199P-201ENST00000411249 104 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 AL139132.1-201ENST00000431587 344 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 RPS3P1-201ENST00000456781 192 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 GTF3AP2-201ENST00000557014 266 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 AC005828.6-201ENST00000606610 232 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 uc_338.14-201ENST00000613162 166 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 AC005562.2-201ENST00000618264 111 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 AC026241.1-201ENST00000517873 2142 ntBASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USPL1Q5W0Q7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 RNU4-80P-201ENST00000363200 141 ntBASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 SNORA19-201ENST00000384737 128 ntBASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 AC091179.1-201ENST00000461606 579 ntBASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 SNORA31.1-201ENST00000515993 133 ntBASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 SNORA31.5-201ENST00000516190 133 ntBASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 SNORD11B-201ENST00000607707 90 ntBASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 MIR622-201ENST00000638396 96 ntBASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.97□□□□□ -1.77
USPL1Q5W0Q7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
USPL1Q5W0Q7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 RNU1-75P-201ENST00000347264 129 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 Y_RNA.40-201ENST00000362645 93 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 RNU6-655P-201ENST00000362858 107 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 OOSP1P1-201ENST00000423265 274 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 AC140059.1-201ENST00000489238 361 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 SNORA70.14-201ENST00000516205 110 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 SNORA31.21-201ENST00000517180 77 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 AC022559.1-201ENST00000520905 205 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 RPL17P51-201ENST00000605218 238 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 AC092628.2-201ENST00000622492 339 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 AC073476.4-201ENST00000628409 72 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 AC000403.1-201ENST00000613696 3585 ntBASIC3.96□□□□□ -1.78
USPL1Q5W0Q7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 RNU4-15P-201ENST00000362613 141 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 RNU6-727P-201ENST00000363592 107 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 RNU6-211P-201ENST00000384047 107 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 RNU1-57P-201ENST00000384491 166 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 MIR186-201ENST00000384988 86 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 AL133475.1-201ENST00000404414 305 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 RN7SKP284-201ENST00000411002 343 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 HMGN2P20-201ENST00000437531 273 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 TMSB4XP3-201ENST00000445144 114 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 AC074198.2-201ENST00000508153 258 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 RNU2-12P-201ENST00000517216 168 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 MRPS18CP4-201ENST00000535821 231 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 MIR4474-201ENST00000579189 78 ntBASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.95□□□□□ -1.78
USPL1Q5W0Q7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 RNU6-1272P-201ENST00000362776 107 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms