Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CLCN1P35523 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCN1P35523 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLCN1P35523 OTUD4P1-201ENST00000237841 3067 ntBASIC4.54□□□□□ -1.68
CLCN1P35523 RNU1-105P-201ENST00000363470 161 ntBASIC4.54□□□□□ -1.68
CLCN1P35523 RNU6-1336P-201ENST00000383886 109 ntBASIC4.54□□□□□ -1.68
CLCN1P35523 RNU6-1144P-201ENST00000384247 104 ntBASIC4.54□□□□□ -1.68
CLCN1P35523 RNY4P18-201ENST00000391107 89 ntBASIC4.54□□□□□ -1.68
CLCN1P35523 MIR1179-201ENST00000408703 91 ntBASIC4.54□□□□□ -1.68
CLCN1P35523 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCN1P35523 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.54□□□□□ -1.68
CLCN1P35523 RPL18P10-201ENST00000425606 538 ntBASIC4.54□□□□□ -1.68
CLCN1P35523 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.54□□□□□ -1.68
CLCN1P35523 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCN1P35523 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCN1P35523 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.54□□□□□ -1.68
CLCN1P35523 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCN1P35523 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.53□□□□□ -1.68
CLCN1P35523 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLCN1P35523 RNU1-14P-201ENST00000362759 152 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 RNU6-674P-201ENST00000363831 107 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 RNU4-13P-201ENST00000364019 141 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 RNU1-132P-201ENST00000364300 164 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 SNORA25.7-201ENST00000364375 127 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLCN1P35523 Y_RNA.432-201ENST00000384087 111 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 RNU6-975P-201ENST00000384296 105 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 MIR181A2-201ENST00000384863 110 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.53□□□□□ -1.68
CLCN1P35523 AL357134.1-201ENST00000445848 426 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 AC016717.1-201ENST00000448918 286 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 AC080013.2-201ENST00000460866 323 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 SNORA31.1-201ENST00000515993 133 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 SNORA31.5-201ENST00000516190 133 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 RNA5SP49-201ENST00000516450 115 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 RN7SKP83-201ENST00000516512 178 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 RNU6-197P-201ENST00000516680 100 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.53□□□□□ -1.68
CLCN1P35523 MTND5P34-201ENST00000568888 325 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 MIR4738-201ENST00000579134 87 ntBASIC4.53□□□□□ -1.68
CLCN1P35523 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.53□□□□□ -1.68
CLCN1P35523 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLCN1P35523 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLCN1P35523 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCN1P35523 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCN1P35523 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.52□□□□□ -1.69
CLCN1P35523 AC008155.2-201ENST00000464337 397 ntBASIC4.52□□□□□ -1.69
CLCN1P35523 RNA5SP112-201ENST00000515937 99 ntBASIC4.52□□□□□ -1.69
CLCN1P35523 RNA5SP519-201ENST00000516480 119 ntBASIC4.52□□□□□ -1.69
CLCN1P35523 MIR5096-201ENST00000583713 70 ntBASIC4.52□□□□□ -1.69
CLCN1P35523 AC023043.3-201ENST00000593113 385 ntBASIC4.52□□□□□ -1.69
CLCN1P35523 AL049861.1-201ENST00000603130 150 ntBASIC4.52□□□□□ -1.69
CLCN1P35523 AL356218.2-201ENST00000605264 187 ntBASIC4.52□□□□□ -1.69
CLCN1P35523 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.52□□□□□ -1.69
CLCN1P35523 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCN1P35523 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.52□□□□□ -1.69
CLCN1P35523 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCN1P35523 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCN1P35523 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLCN1P35523 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLCN1P35523 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.51□□□□□ -1.69
CLCN1P35523 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
CLCN1P35523 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.51□□□□□ -1.69
CLCN1P35523 RNU6-234P-201ENST00000365229 104 ntBASIC4.51□□□□□ -1.69
CLCN1P35523 AP000567.1-201ENST00000406413 156 ntBASIC4.51□□□□□ -1.69
CLCN1P35523 AL158823.1-201ENST00000418441 478 ntBASIC4.51□□□□□ -1.69
CLCN1P35523 ARF4P2-201ENST00000430209 526 ntBASIC4.51□□□□□ -1.69
CLCN1P35523 CYCTP-201ENST00000504253 315 ntBASIC4.51□□□□□ -1.69
CLCN1P35523 AC109329.2-201ENST00000519658 482 ntBASIC4.51□□□□□ -1.69
CLCN1P35523 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCN1P35523 AC106785.1-201ENST00000565935 262 ntBASIC4.51□□□□□ -1.69
CLCN1P35523 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN1P35523 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLCN1P35523 RNA5SP354-201ENST00000391247 136 ntBASIC4.5□□□□□ -1.69
CLCN1P35523 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCN1P35523 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.5□□□□□ -1.69
CLCN1P35523 RPS29P19-201ENST00000479709 171 ntBASIC4.5□□□□□ -1.69
CLCN1P35523 AC083906.5-201ENST00000503722 328 ntBASIC4.5□□□□□ -1.69
CLCN1P35523 RNU6-1299P-201ENST00000516316 100 ntBASIC4.5□□□□□ -1.69
CLCN1P35523 Y_RNA.692-201ENST00000516627 105 ntBASIC4.5□□□□□ -1.69
CLCN1P35523 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCN1P35523 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCN1P35523 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN1P35523 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCN1P35523 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN1P35523 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN1P35523 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN1P35523 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCN1P35523 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CLCN1P35523 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCN1P35523 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCN1P35523 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCN1P35523 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLCN1P35523 RNA5SP509-201ENST00000364577 119 ntBASIC4.49□□□□□ -1.69
CLCN1P35523 RNA5SP511-201ENST00000410487 115 ntBASIC4.49□□□□□ -1.69
CLCN1P35523 RNU2-55P-201ENST00000411146 174 ntBASIC4.49□□□□□ -1.69
CLCN1P35523 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.49□□□□□ -1.69
CLCN1P35523 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.49□□□□□ -1.69
CLCN1P35523 AC090515.1-201ENST00000465295 476 ntBASIC4.49□□□□□ -1.69
CLCN1P35523 AC109327.1-201ENST00000471666 403 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms