Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 SNRPGP3-201ENST00000469405 227 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 AC091167.1-201ENST00000492017 396 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 AC083906.5-201ENST00000503722 328 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR449C-201ENST00000516047 92 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU7-143P-201ENST00000516781 65 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR4284-201ENST00000578924 81 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR378D2-201ENST00000580636 98 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 AC008745.1-201ENST00000604064 271 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 OTUD4P1-201ENST00000237841 3067 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 Z82217.1-201ENST00000625157 8149 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 AC110774.1-201ENST00000623567 2018 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU4-13P-201ENST00000364019 141 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU4-41P-201ENST00000364426 143 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 Y_RNA.587-201ENST00000391210 103 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU2-55P-201ENST00000411146 174 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU6-57P-201ENST00000411348 103 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 AC245047.4-201ENST00000433189 144 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU6-659P-201ENST00000516454 104 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 AC109329.2-201ENST00000519658 482 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR8059-201ENST00000620427 81 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 AC006435.5-201ENST00000624486 112 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 AL773545.4-201ENST00000637262 310 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 AL513478.4-201ENST00000641636 310 ntBASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGA11Q9Y5H2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 AL356292.1-201ENST00000283110 373 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 SNORD31B-201ENST00000364977 69 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 SNRPGP8-201ENST00000454064 226 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU7-170P-201ENST00000459303 61 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 RN7SL604P-201ENST00000492589 296 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 RPS27P26-201ENST00000494583 239 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 AC090049.2-201ENST00000550377 109 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 RN7SL703P-201ENST00000578485 302 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 AL031274.2-201ENST00000599419 203 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 AC244505.7-201ENST00000599675 272 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 AC112484.5-201ENST00000624189 228 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR7641-1-201ENST00000627518 61 ntBASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA11Q9Y5H2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 SNORD35B-201ENST00000363660 87 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 Y_RNA.563-201ENST00000384707 108 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR181A2-201ENST00000384863 110 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 Y_RNA.584-201ENST00000391090 114 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 RN7SKP101-201ENST00000411376 320 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 AC008134.1-201ENST00000420943 193 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 RPL18P10-201ENST00000425606 538 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 AC017083.1-201ENST00000428093 483 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 AL353705.1-201ENST00000433468 480 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 RN7SL481P-201ENST00000477764 299 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 RPL31P61-201ENST00000496160 376 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 AC093331.1-201ENST00000521474 169 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 AC025627.2-201ENST00000576220 160 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 Y_RNA.757-201ENST00000578934 114 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR5684-201ENST00000585074 65 ntBASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA11Q9Y5H2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 Y_RNA.251-201ENST00000364551 99 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU6-915P-201ENST00000364943 103 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR1251-201ENST00000408552 70 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR1278-201ENST00000408753 81 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU2-52P-201ENST00000410680 190 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 AC023449.1-201ENST00000454464 154 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms