Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU4-41P-201ENST00000364426 143 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 RNA5SP189-201ENST00000364920 115 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 RNA5SP97-201ENST00000365006 84 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 SNORD18B-201ENST00000365659 72 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 Y_RNA.432-201ENST00000384087 111 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 MIR548A1-201ENST00000385041 97 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 SNORA12-201ENST00000391162 147 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 AL355796.1-201ENST00000406706 323 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 Y_RNA.617-201ENST00000410920 90 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 AL031737.1-201ENST00000450125 223 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 AL441985.1-201ENST00000457727 251 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 snoU13.28-201ENST00000459235 104 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 AC090515.1-201ENST00000465295 476 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 RPS29P24-201ENST00000486345 171 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 AC026726.1-201ENST00000512859 601 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 SNORD19.2-201ENST00000516978 73 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 MIR3690-201ENST00000580266 75 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 AC131055.1-201ENST00000584626 316 ntBASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PCDHGC4Q9Y5F7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU6-647P-201ENST00000364243 107 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU6-484P-201ENST00000384016 107 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU6-880P-201ENST00000384526 107 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 MIR586-201ENST00000385035 97 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNA5SP239-201ENST00000410218 129 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RN7SKP177-201ENST00000410567 355 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU2-55P-201ENST00000411146 174 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNA5SP39-201ENST00000411245 120 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AC004552.1-201ENST00000419089 348 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNA5SP310-201ENST00000459084 116 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RPS26P3-201ENST00000470205 348 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RPS26P45-201ENST00000471748 340 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AC090543.2-201ENST00000483963 348 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AC004057.1-201ENST00000485827 348 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RN7SL323P-201ENST00000494712 295 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU6-781P-201ENST00000516377 101 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 Y_RNA.677-201ENST00000516401 85 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 Y_RNA.690-201ENST00000516603 95 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU7-116P-201ENST00000516940 62 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU1-45P-201ENST00000517191 141 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 MIR3609-201ENST00000582661 80 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AC006130.2-201ENST00000586202 326 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AC012493.2-201ENST00000595083 291 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AC005972.2-201ENST00000604690 348 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AL110115.1-201ENST00000614396 364 ntBASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGC4Q9Y5F7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 AC018555.1-201ENST00000567548 1980 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 snoU2_19.1-201ENST00000362361 80 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU6-655P-201ENST00000362858 107 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU6-136P-201ENST00000384663 107 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 RNA5SP171-201ENST00000391071 115 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 AC007256.1-201ENST00000392253 2765 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 AL603914.1-201ENST00000401964 204 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 AP000873.1-201ENST00000463987 400 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU6-1299P-201ENST00000516316 100 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU6-537P-201ENST00000517277 103 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 AL049861.1-201ENST00000603130 150 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 AL138880.2-201ENST00000616214 239 ntBASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGC4Q9Y5F7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHGC4Q9Y5F7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.9□□□□□ -1.78
PCDHGC4Q9Y5F7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
PCDHGC4Q9Y5F7 RNU6-508P-201ENST00000363231 103 ntBASIC3.9□□□□□ -1.79
PCDHGC4Q9Y5F7 RNU6-674P-201ENST00000363831 107 ntBASIC3.9□□□□□ -1.79
PCDHGC4Q9Y5F7 MIR30B-201ENST00000384850 88 ntBASIC3.9□□□□□ -1.79
PCDHGC4Q9Y5F7 MIR147B-201ENST00000390185 80 ntBASIC3.9□□□□□ -1.79
PCDHGC4Q9Y5F7 MIR1302-4-201ENST00000408701 150 ntBASIC3.9□□□□□ -1.79
PCDHGC4Q9Y5F7 RN7SKP284-201ENST00000411002 343 ntBASIC3.9□□□□□ -1.79
PCDHGC4Q9Y5F7 CRYBB2P1-203ENST00000415709 538 ntBASIC3.9□□□□□ -1.79
PCDHGC4Q9Y5F7 Y_RNA.649-201ENST00000459077 103 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms