Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 RNA5SP317-201ENST00000410176 116 ntBASIC4.54□□□□□ -1.68
LHX6Q9UPM6 RNA5SP311-201ENST00000411290 116 ntBASIC4.54□□□□□ -1.68
LHX6Q9UPM6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 SCGB1D5P-201ENST00000515134 247 ntBASIC4.54□□□□□ -1.68
LHX6Q9UPM6 RNA5SP315-201ENST00000516340 116 ntBASIC4.54□□□□□ -1.68
LHX6Q9UPM6 Y_RNA.714-201ENST00000517065 90 ntBASIC4.54□□□□□ -1.68
LHX6Q9UPM6 RNA5SP312-201ENST00000517068 116 ntBASIC4.54□□□□□ -1.68
LHX6Q9UPM6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 AC022217.4-201ENST00000604389 163 ntBASIC4.54□□□□□ -1.68
LHX6Q9UPM6 FAM27B-201ENST00000610601 213 ntBASIC4.54□□□□□ -1.68
LHX6Q9UPM6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 AC104623.2-202ENST00000623477 4002 ntBASIC4.54□□□□□ -1.68
LHX6Q9UPM6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.54□□□□□ -1.68
LHX6Q9UPM6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 AL672167.1-203ENST00000641299 2975 ntBASIC4.53□□□□□ -1.68
LHX6Q9UPM6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 RNU6-590P-201ENST00000365039 107 ntBASIC4.53□□□□□ -1.68
LHX6Q9UPM6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 SNORA9-201ENST00000384215 133 ntBASIC4.53□□□□□ -1.68
LHX6Q9UPM6 RNU4-69P-201ENST00000410677 143 ntBASIC4.53□□□□□ -1.68
LHX6Q9UPM6 CYCSP19-201ENST00000411715 316 ntBASIC4.53□□□□□ -1.68
LHX6Q9UPM6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 RNU2-34P-201ENST00000516534 121 ntBASIC4.53□□□□□ -1.68
LHX6Q9UPM6 MIR6839-201ENST00000620425 113 ntBASIC4.53□□□□□ -1.68
LHX6Q9UPM6 AC064859.1-201ENST00000624741 174 ntBASIC4.53□□□□□ -1.68
LHX6Q9UPM6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.53□□□□□ -1.68
LHX6Q9UPM6 ZNF271P-202ENST00000465539 1970 ntBASIC4.53□□□□□ -1.68
LHX6Q9UPM6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
LHX6Q9UPM6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 OR51H2P-202ENST00000641424 3046 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 Y_RNA.37-201ENST00000362606 108 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 RNA5SP307-201ENST00000362863 116 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 SNORA14A-201ENST00000364773 135 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 Y_RNA.467-201ENST00000384297 102 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 SNORA70.10-201ENST00000384515 134 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 RNU2-40P-201ENST00000410833 196 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 AC114755.2-201ENST00000413520 361 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 RPS29P9-201ENST00000440360 171 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 RNU7-80P-201ENST00000459562 61 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 RPS23P4-201ENST00000487908 423 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 IGLVIV-65-201ENST00000517313 360 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 MIR3609-201ENST00000582661 80 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 AP005019.3-201ENST00000620418 560 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 AP003122.5-201ENST00000527668 3766 ntBASIC4.52□□□□□ -1.69
LHX6Q9UPM6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LHX6Q9UPM6 MFSD8-236ENST00000641509 4050 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 SALL4P2-201ENST00000423288 2910 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 SNORD115-28-201ENST00000363931 81 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 Y_RNA.191-201ENST00000363972 113 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 RNU6-1229P-201ENST00000364295 107 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 Y_RNA.440-201ENST00000384120 114 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 AC009238.2-201ENST00000431026 355 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms