Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 RNA5SP127-201ENST00000411051 133 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 AC008134.1-201ENST00000420943 193 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 AC099548.1-201ENST00000421443 426 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 RNA5SP236-201ENST00000516169 116 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 RNU2-27P-201ENST00000516185 142 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 MIR5187-201ENST00000583479 76 ntBASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL25A1Q9BXS0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 Y_RNA.17-201ENST00000362433 111 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 SNORA54-201ENST00000384281 123 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 EI24P2-201ENST00000397776 1076 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 RN7SKP16-201ENST00000410180 299 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 ATP5A1P2-201ENST00000412323 255 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 AC027124.2-201ENST00000428249 105 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 RPL37P4-201ENST00000448908 268 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 UBL5P3-201ENST00000475112 231 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 AIG1P1-201ENST00000503376 148 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 RNU6-1337P-201ENST00000516525 95 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 RNU7-116P-201ENST00000516940 62 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 CYCSP40-201ENST00000575927 294 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 MIR5009-201ENST00000578736 100 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 MIR5684-201ENST00000585074 65 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 AC091167.4-201ENST00000605079 184 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 AC093732.2-201ENST00000607950 274 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL25A1Q9BXS0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 AC007256.1-201ENST00000392253 2765 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 MIR302B-201ENST00000362188 73 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 RNU6-1280P-201ENST00000365211 107 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 RNU6-487P-201ENST00000365430 104 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 RNA5SP201-201ENST00000410316 124 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 AC007738.1-201ENST00000413892 348 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 RPL23AP82-202ENST00000427528 469 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 RPL23AP7-203ENST00000449021 469 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 CENPBD1P1-201ENST00000464061 469 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 AC022137.1-201ENST00000483735 151 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 AC139453.2-201ENST00000487255 133 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 RPL36AP21-201ENST00000490372 323 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 SNORD77.4-201ENST00000516158 81 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 RNU6-904P-201ENST00000516206 101 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 AC027176.1-201ENST00000560204 514 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 PCGEM1.1-201ENST00000613431 131 ntBASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
COL25A1Q9BXS0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 Z73965.1-201ENST00000623412 2297 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 Y_RNA.93-201ENST00000363066 109 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 U3.15-201ENST00000365398 212 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 MIR548B-201ENST00000385247 97 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 MIR325-201ENST00000385260 98 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 HMGN2P30-201ENST00000423237 256 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 IFNWP4-201ENST00000453148 294 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 RNA5SP490-201ENST00000517141 136 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 AC069240.1-201ENST00000548774 375 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 AC105245.1-201ENST00000581934 244 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 MIR5006-201ENST00000583027 110 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 AL365205.2-201ENST00000594586 68 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms