Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 MFSD8-233ENST00000641482 4860 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 RNU6-1266P-201ENST00000362794 105 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 Y_RNA.84-201ENST00000363011 104 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 MIR548B-201ENST00000385247 97 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 RNA5SP504-201ENST00000410676 117 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 AL139281.1-201ENST00000422120 335 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 RNU7-26P-201ENST00000458980 63 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 AC008155.2-201ENST00000464337 397 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 RNU6-991P-201ENST00000516168 107 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 RNU6-155P-201ENST00000516347 100 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 SNORA70.18-201ENST00000516696 98 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 MIR3684-201ENST00000579779 74 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 AC006006.1-201ENST00000603082 144 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 AC025754.2-201ENST00000606491 432 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 AC062037.2-201ENST00000610137 73 ntBASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
TRAIPQ9BWF2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 POLR2KP2-201ENST00000438155 177 ntBASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 RPS29P31-201ENST00000446147 164 ntBASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 MTND4LP30-201ENST00000454092 297 ntBASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 AC016925.1-201ENST00000458303 298 ntBASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 AC107222.1-201ENST00000510899 637 ntBASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 RPPH1-2P-201ENST00000516688 293 ntBASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 MIR5195-201ENST00000583555 115 ntBASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 AC022441.3-201ENST00000605737 136 ntBASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TRAIPQ9BWF2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 RNU6-290P-201ENST00000365212 101 ntBASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 RNU6-1203P-201ENST00000410703 110 ntBASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 SNORA4.4-201ENST00000515921 135 ntBASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 RNU6-496P-201ENST00000516145 99 ntBASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 MIR4738-201ENST00000579134 87 ntBASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 AC107871.2-201ENST00000612894 502 ntBASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAIPQ9BWF2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 AL391987.6-201ENST00000305671 199 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 Y_RNA.446-201ENST00000384178 104 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 RNU6-514P-201ENST00000384208 107 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 RNU6-975P-201ENST00000384296 105 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 Y_RNA.483-201ENST00000384380 101 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 MIR215-201ENST00000384858 110 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 MIR23A-201ENST00000385245 73 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 SNORD17-201ENST00000390930 237 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 DBIP2-201ENST00000419076 262 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 AC024067.1-201ENST00000426199 223 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 RNU2-34P-201ENST00000516534 121 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 AC013412.1-201ENST00000610687 192 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 RNVU1-4-201ENST00000612985 164 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 snoZ196.1-201ENST00000625269 89 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 IGHVIII-44-202ENST00000636235 289 ntBASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.85□□□□□ -1.79
TRAIPQ9BWF2 MTND5P6-201ENST00000422338 1798 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 snoU2_19.2-201ENST00000363024 80 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 RNU6-324P-201ENST00000363957 106 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 RNU6-505P-201ENST00000384427 107 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 Y_RNA.569-201ENST00000384749 103 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 MT-TW-201ENST00000387382 68 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 RNU2-54P-201ENST00000410299 190 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 AC123900.1-201ENST00000420390 96 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 AC006989.1-201ENST00000427212 131 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 AC245102.2-201ENST00000448956 180 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 RN7SL594P-201ENST00000470590 287 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 RN7SL807P-201ENST00000470923 297 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 AC026271.5-201ENST00000577873 130 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 AC008749.1-201ENST00000597650 306 ntBASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRAIPQ9BWF2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRAIPQ9BWF2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
TRAIPQ9BWF2 AC010615.1-201ENST00000594254 1764 ntBASIC3.84□□□□□ -1.8
TRAIPQ9BWF2 AC009487.4-201ENST00000624969 3585 ntBASIC3.83□□□□□ -1.8
TRAIPQ9BWF2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAIPQ9BWF2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAIPQ9BWF2 RNU4-35P-201ENST00000362588 141 ntBASIC3.83□□□□□ -1.8
TRAIPQ9BWF2 Y_RNA.188-201ENST00000363952 111 ntBASIC3.83□□□□□ -1.8
TRAIPQ9BWF2 MIR491-201ENST00000384877 84 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms