Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RN7SKP209-201ENST00000516888 304 ntBASIC4.18□□□□□ -1.74
VTI1AQ96AJ9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.18□□□□□ -1.74
VTI1AQ96AJ9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.18□□□□□ -1.74
VTI1AQ96AJ9 AC009127.3-201ENST00000570531 403 ntBASIC4.18□□□□□ -1.74
VTI1AQ96AJ9 AL391813.1-201ENST00000603098 260 ntBASIC4.18□□□□□ -1.74
VTI1AQ96AJ9 SNORD11B-201ENST00000607707 90 ntBASIC4.18□□□□□ -1.74
VTI1AQ96AJ9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.18□□□□□ -1.74
VTI1AQ96AJ9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VTI1AQ96AJ9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VTI1AQ96AJ9 RNU1-75P-201ENST00000347264 129 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 U3.9-201ENST00000363823 204 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 RNA5SP267-201ENST00000364893 126 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 RNA5SP252-201ENST00000391131 119 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 AL441985.1-201ENST00000457727 251 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 RNU1-117P-201ENST00000517041 158 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 SNORA31.21-201ENST00000517180 77 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 AL137849.1-201ENST00000604767 169 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 AC005000.2-201ENST00000605468 310 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 AL365361.1-201ENST00000566942 3481 ntBASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VTI1AQ96AJ9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 Y_RNA.111-201ENST00000363248 100 ntBASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 SNORD115-30-201ENST00000364117 82 ntBASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 RNU4-17P-201ENST00000365598 141 ntBASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 RN7SKP57-201ENST00000517248 293 ntBASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 AC100767.1-201ENST00000528178 123 ntBASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 MIR5006-201ENST00000583027 110 ntBASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 RNU1-30P-201ENST00000606575 163 ntBASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 AC068205.3-201ENST00000636385 468 ntBASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.16□□□□□ -1.74
VTI1AQ96AJ9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VTI1AQ96AJ9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VTI1AQ96AJ9 RNU1-101P-201ENST00000391171 127 ntBASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 SNORA26.5-201ENST00000391215 123 ntBASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 AL031003.1-201ENST00000404229 172 ntBASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 RPS3P1-201ENST00000456781 192 ntBASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 AC146507.2-201ENST00000460608 476 ntBASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 MIR548AI-201ENST00000579940 88 ntBASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 MIR3651-201ENST00000630427 90 ntBASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VTI1AQ96AJ9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 Y_RNA.75-201ENST00000362927 97 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 RNU1-105P-201ENST00000363470 161 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 Y_RNA.182-201ENST00000363880 111 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 SEPT7P4-201ENST00000437076 306 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 AC112771.1-201ENST00000463581 102 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 RN7SL601P-201ENST00000471221 293 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 RPS27AP9-201ENST00000477681 438 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 AC027176.1-201ENST00000560204 514 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 SNORA62.6-201ENST00000606322 83 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 MTND1P7-201ENST00000632801 297 ntBASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VTI1AQ96AJ9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 Y_RNA.23-201ENST00000362496 106 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 RNU6-655P-201ENST00000362858 107 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 RNU1-18P-201ENST00000363062 164 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 Y_RNA.121-201ENST00000363309 113 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 RNU6-1210P-201ENST00000363775 107 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 RNU6-312P-201ENST00000364629 107 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 SNORA67.2-201ENST00000384300 149 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 SNORA40.19-201ENST00000390846 128 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 AC091179.1-201ENST00000461606 579 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 RNU2-44P-201ENST00000516795 194 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms