Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 Y_RNA.136-201ENST00000363444 102 ntBASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 SNORD116-18-201ENST00000383961 92 ntBASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 MIR513A2-201ENST00000385249 127 ntBASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 Y_RNA.597-201ENST00000410463 100 ntBASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 RNU5E-9P-201ENST00000411164 104 ntBASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 BMS1P22-201ENST00000414726 313 ntBASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 OOSP1P1-201ENST00000423265 274 ntBASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 AC025518.1-201ENST00000479856 347 ntBASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 AC068205.3-201ENST00000636385 468 ntBASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 MIR448-201ENST00000362131 111 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 Y_RNA.81-201ENST00000362997 102 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 Y_RNA.435-201ENST00000384095 112 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 Y_RNA.441-201ENST00000384123 112 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 RNU6-22P-201ENST00000384355 107 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 RNA5SP475-201ENST00000410568 110 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 RAB28P5-201ENST00000427490 651 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 RPL30P4-201ENST00000429309 333 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 CYP2C59P-201ENST00000457790 269 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 RPS29P2-201ENST00000479278 136 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 AC083906.5-201ENST00000503722 328 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 RNU5F-4P-201ENST00000516581 114 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 RNU6-107P-201ENST00000516643 102 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 TGIF1P1-201ENST00000558095 802 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 AL357075.2-201ENST00000614906 189 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 MIR5739-201ENST00000619803 80 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 AP003355.3-201ENST00000623465 114 ntBASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS4Q8IUM7 AC092435.3-201ENST00000565538 3654 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 SNORA38.1-201ENST00000364172 131 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 RNU6-1264P-201ENST00000383891 107 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 MIR218-1-201ENST00000384999 110 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 MIR634-201ENST00000385208 97 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 SNORD17-201ENST00000390930 237 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 SNORA12-201ENST00000391162 147 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 RNU6-735P-201ENST00000410612 107 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 AC074290.1-201ENST00000448883 135 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 AC005042.3-201ENST00000453230 174 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 AC080013.2-201ENST00000460866 323 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 AC055872.1-201ENST00000570978 278 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.85□□□□□ -1.79
NPAS4Q8IUM7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 Y_RNA.217-201ENST00000364214 105 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 SNORD32B-201ENST00000364460 84 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 Y_RNA.272-201ENST00000364696 102 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 Y_RNA.497-201ENST00000384447 98 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 RNU6-959P-201ENST00000384671 107 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 MIR1289-1-201ENST00000408836 144 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 RNA5SP306-201ENST00000411087 107 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 Z82209.1-201ENST00000422141 2135 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 AC115115.1-201ENST00000449927 248 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 Y_RNA.641-201ENST00000459414 105 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 RNU6-966P-201ENST00000516479 104 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 RN7SKP209-201ENST00000516888 304 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 RNU1-117P-201ENST00000517041 158 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 U4.6-201ENST00000621618 127 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 SNORA50A-202ENST00000629536 136 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 MIR3674-201ENST00000636576 68 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 MAPK10-253ENST00000641010 4072 ntBASIC3.84□□□□□ -1.79
NPAS4Q8IUM7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.84□□□□□ -1.8
NPAS4Q8IUM7 MAPK10-373ENST00000641983 6772 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 Y_RNA.262-201ENST00000364641 102 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 RNU6-131P-201ENST00000391144 107 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms