Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.24□□□□□ -1.73
NR1H3Q13133 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H3Q13133 ZNF702P-202ENST00000434269 1966 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 RNU1-105P-201ENST00000363470 161 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 RNU6-271P-201ENST00000363858 105 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 RNY3P5-201ENST00000384127 102 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 MIR200C-201ENST00000384980 68 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 MIR300-201ENST00000401138 83 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 AL139095.1-201ENST00000404326 391 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 RPL23AP48-201ENST00000406913 488 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 MIR1283-1-201ENST00000408494 87 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 AL121890.1-201ENST00000435457 205 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.23□□□□□ -1.73
NR1H3Q13133 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.23□□□□□ -1.73
NR1H3Q13133 AC006011.1-201ENST00000442758 349 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 RNU7-57P-201ENST00000459540 60 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 RN7SL542P-201ENST00000467147 294 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 AC092991.1-201ENST00000477176 376 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 RPL29P14-201ENST00000495837 428 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 RPL31P61-201ENST00000496160 376 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 RNU4-57P-201ENST00000515980 135 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.23□□□□□ -1.73
NR1H3Q13133 MIR5685-201ENST00000579080 79 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 MIR4429-201ENST00000580105 73 ntBASIC4.23□□□□□ -1.73
NR1H3Q13133 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.23□□□□□ -1.73
NR1H3Q13133 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NR1H3Q13133 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NR1H3Q13133 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NR1H3Q13133 RNU6-1180P-201ENST00000364935 107 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 Y_RNA.393-201ENST00000383936 102 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 RNU6-44P-201ENST00000384045 107 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 SNORA20B-201ENST00000384220 132 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 RNU6-460P-201ENST00000391158 108 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 AL355796.1-201ENST00000406706 323 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 AL358232.1-201ENST00000448030 501 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 RNU7-14P-201ENST00000459331 62 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.22□□□□□ -1.73
NR1H3Q13133 SNORA31.1-201ENST00000515993 133 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 SNORA31.5-201ENST00000516190 133 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 SNORA67.7-201ENST00000516664 135 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 AP001328.1-201ENST00000528550 176 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NR1H3Q13133 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
NR1H3Q13133 AL773545.4-201ENST00000637262 310 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 AL513478.4-201ENST00000641636 310 ntBASIC4.22□□□□□ -1.73
NR1H3Q13133 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NR1H3Q13133 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NR1H3Q13133 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NR1H3Q13133 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NR1H3Q13133 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NR1H3Q13133 AL159152.1-201ENST00000635019 2587 ntBASIC4.21□□□□□ -1.73
NR1H3Q13133 FAM35DP-201ENST00000323387 2712 ntBASIC4.21□□□□□ -1.74
NR1H3Q13133 AP000567.1-201ENST00000406413 156 ntBASIC4.21□□□□□ -1.74
NR1H3Q13133 MIR1294-201ENST00000408503 142 ntBASIC4.21□□□□□ -1.74
NR1H3Q13133 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.21□□□□□ -1.74
NR1H3Q13133 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.21□□□□□ -1.74
NR1H3Q13133 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.21□□□□□ -1.74
NR1H3Q13133 AC025627.2-201ENST00000576220 160 ntBASIC4.21□□□□□ -1.74
NR1H3Q13133 RN7SL703P-201ENST00000578485 302 ntBASIC4.21□□□□□ -1.74
NR1H3Q13133 MIR4765-201ENST00000585007 77 ntBASIC4.21□□□□□ -1.74
NR1H3Q13133 AP003357.1-201ENST00000604497 148 ntBASIC4.21□□□□□ -1.74
NR1H3Q13133 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NR1H3Q13133 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NR1H3Q13133 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NR1H3Q13133 AC110774.1-201ENST00000623567 2018 ntBASIC4.21□□□□□ -1.74
NR1H3Q13133 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.21□□□□□ -1.74
NR1H3Q13133 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NR1H3Q13133 IPO8P1-201ENST00000455509 3109 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.2□□□□□ -1.74
NR1H3Q13133 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.2□□□□□ -1.74
NR1H3Q13133 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.2□□□□□ -1.74
NR1H3Q13133 RNU6-1325P-201ENST00000364905 105 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 RNU4-43P-201ENST00000410628 137 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 RN7SL271P-201ENST00000487601 295 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 RNU2-56P-201ENST00000516826 190 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.2□□□□□ -1.74
NR1H3Q13133 AC103810.1-201ENST00000579873 453 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 MIR5684-201ENST00000585074 65 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 POLR3GP1-201ENST00000594073 261 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 MIR7151-201ENST00000617477 60 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 AC012640.5-201ENST00000623897 319 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 AP001340.1-201ENST00000624405 217 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 snoZ196.1-201ENST00000625269 89 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.2□□□□□ -1.74
NR1H3Q13133 AL353746.1-201ENST00000566293 6881 ntBASIC4.2□□□□□ -1.74
NR1H3Q13133 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NR1H3Q13133 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
NR1H3Q13133 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NR1H3Q13133 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.19□□□□□ -1.74
NR1H3Q13133 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NR1H3Q13133 AL161912.2-201ENST00000565707 3007 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NR1H3Q13133 SNORA27.1-201ENST00000362604 124 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 RNU6-1323P-201ENST00000384025 107 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 SNORD116-13-201ENST00000384408 92 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 SNORA79-201ENST00000408376 140 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 RNU6-588P-201ENST00000410281 105 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 RPS26P55-201ENST00000471178 356 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms