Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.87□□□□□ -1.95
CLRN1P58418 AP002001.1-203ENST00000534002 267 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AC022080.3-201ENST00000544433 482 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AC130289.1-201ENST00000577321 73 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AC008739.2-201ENST00000597006 317 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 SNORD11B-201ENST00000607707 90 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AC019176.2-201ENST00000611579 315 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AL590240.4-201ENST00000616908 390 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.87□□□□□ -1.95
CLRN1P58418 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.87□□□□□ -1.95
CLRN1P58418 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLRN1P58418 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLRN1P58418 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.87□□□□□ -1.95
CLRN1P58418 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLRN1P58418 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.86□□□□□ -1.95
CLRN1P58418 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLRN1P58418 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CLRN1P58418 SNORA25.1-201ENST00000362326 128 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 RNU6-486P-201ENST00000363116 107 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 RNY1-201ENST00000364228 113 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 SNORD87-201ENST00000364849 89 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 RNU6-1027P-201ENST00000383998 107 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 RNA5SP475-201ENST00000410568 110 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.86□□□□□ -1.95
CLRN1P58418 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.86□□□□□ -1.95
CLRN1P58418 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.86□□□□□ -1.95
CLRN1P58418 RNU6-344P-201ENST00000516635 111 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 RNU6-107P-201ENST00000516643 102 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 RNU1-117P-201ENST00000517041 158 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 SCARNA11.3-201ENST00000517276 130 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.86□□□□□ -1.95
CLRN1P58418 AC090517.3-201ENST00000625170 141 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 MIR3674-201ENST00000636576 68 ntBASIC2.86□□□□□ -1.95
CLRN1P58418 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.86□□□□□ -1.95
CLRN1P58418 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLRN1P58418 MIR410-201ENST00000362222 80 ntBASIC2.85□□□□□ -1.95
CLRN1P58418 Y_RNA.418-201ENST00000384029 102 ntBASIC2.85□□□□□ -1.95
CLRN1P58418 RNU6-1310P-201ENST00000384153 107 ntBASIC2.85□□□□□ -1.95
CLRN1P58418 RNA5SP504-201ENST00000410676 117 ntBASIC2.85□□□□□ -1.95
CLRN1P58418 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.85□□□□□ -1.95
CLRN1P58418 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.85□□□□□ -1.95
CLRN1P58418 AC009237.7-201ENST00000447357 229 ntBASIC2.85□□□□□ -1.95
CLRN1P58418 AC008155.2-201ENST00000464337 397 ntBASIC2.85□□□□□ -1.95
CLRN1P58418 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.85□□□□□ -1.95
CLRN1P58418 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.85□□□□□ -1.95
CLRN1P58418 uc_338.25-201ENST00000613756 156 ntBASIC2.85□□□□□ -1.95
CLRN1P58418 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CLRN1P58418 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.85□□□□□ -1.95
CLRN1P58418 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLRN1P58418 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.85□□□□□ -1.95
CLRN1P58418 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLRN1P58418 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.84□□□□□ -1.95
CLRN1P58418 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLRN1P58418 MAPK10-362ENST00000641864 4484 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 RNA5SP119-201ENST00000362715 117 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 Y_RNA.76-201ENST00000362931 109 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 SNORD32B-201ENST00000364460 84 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 RNU6-805P-201ENST00000365643 106 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 RNU6-514P-201ENST00000384208 107 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 MIR29B2-201ENST00000385055 81 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 Y_RNA.597-201ENST00000410463 100 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 RNU6-1328P-201ENST00000410938 106 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 RNU6-1199P-201ENST00000411249 104 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 MTCO1P5-201ENST00000433573 344 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CLRN1P58418 PRSS3P4-201ENST00000453323 162 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 RNU6-155P-201ENST00000516347 100 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 SCARNA20.6-201ENST00000517251 106 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.84□□□□□ -1.95
CLRN1P58418 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.84□□□□□ -1.95
CLRN1P58418 RPL21P9-201ENST00000556149 474 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 AC012314.7-201ENST00000619693 93 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 AC068205.3-201ENST00000636385 468 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 U6.105-201ENST00000637379 88 ntBASIC2.84□□□□□ -1.95
CLRN1P58418 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CLRN1P58418 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CLRN1P58418 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.96
CLRN1P58418 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.96
CLRN1P58418 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.83□□□□□ -1.96
CLRN1P58418 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLRN1P58418 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLRN1P58418 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLRN1P58418 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.83□□□□□ -1.96
CLRN1P58418 Y_RNA.136-201ENST00000363444 102 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 Y_RNA.274-201ENST00000364714 101 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 RNU6-740P-201ENST00000364734 105 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 RNU6-1264P-201ENST00000383891 107 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 MIR183-201ENST00000384958 110 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 AL139156.1-201ENST00000412785 841 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.83□□□□□ -1.96
CLRN1P58418 AC091959.1-201ENST00000495857 238 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 RNU1-143P-201ENST00000516296 146 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 AL109918.3-201ENST00000603072 338 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.83□□□□□ -1.96
CLRN1P58418 AC107294.3-201ENST00000609211 526 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 U1.23-201ENST00000610293 146 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.83□□□□□ -1.96
CLRN1P58418 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms