Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.87□□□□□ -1.79
CHRNA4P43681 TRBV12-2-201ENST00000489763 344 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 RNU6-109P-201ENST00000516364 107 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 RNU6-184P-201ENST00000516514 107 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 AC053481.4-201ENST00000583164 216 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 AL035470.1-201ENST00000622571 220 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 AC068205.3-201ENST00000636385 468 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 U2.21-201ENST00000637295 81 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
CHRNA4P43681 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CHRNA4P43681 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.87□□□□□ -1.79
CHRNA4P43681 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CHRNA4P43681 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.86□□□□□ -1.79
CHRNA4P43681 AL513302.2-201ENST00000562313 1842 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CHRNA4P43681 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CHRNA4P43681 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CHRNA4P43681 RNA5SP97-201ENST00000365006 84 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 MIR590-201ENST00000385008 97 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 RNU6-972P-201ENST00000391208 107 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 FTH1P15-201ENST00000406984 280 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 RNU6-628P-201ENST00000410675 107 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 RNA5SP504-201ENST00000410676 117 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 RNA5SP136-201ENST00000410906 107 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 AL590383.1-201ENST00000428602 75 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.86□□□□□ -1.79
CHRNA4P43681 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.86□□□□□ -1.79
CHRNA4P43681 SNORA71B-202ENST00000439232 272 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 RPS29P7-201ENST00000439662 171 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 AC125238.1-201ENST00000448842 249 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 RNU6-1299P-201ENST00000516316 100 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 RNU1-103P-201ENST00000516502 125 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 SCARNA14-201ENST00000516903 136 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 MIR4429-201ENST00000580105 73 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 AC097639.2-201ENST00000603159 172 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 AL162713.1-201ENST00000604480 262 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 AP003357.1-201ENST00000604497 148 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.86□□□□□ -1.79
CHRNA4P43681 AL138880.2-201ENST00000616214 239 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 AL590808.1-201ENST00000618696 141 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.86□□□□□ -1.79
CHRNA4P43681 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.86□□□□□ -1.79
CHRNA4P43681 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.86□□□□□ -1.79
CHRNA4P43681 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.86□□□□□ -1.79
CHRNA4P43681 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CHRNA4P43681 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CHRNA4P43681 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CHRNA4P43681 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.86□□□□□ -1.79
CHRNA4P43681 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CHRNA4P43681 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.86□□□□□ -1.79
CHRNA4P43681 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA4P43681 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA4P43681 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.85□□□□□ -1.79
CHRNA4P43681 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.85□□□□□ -1.79
CHRNA4P43681 Y_RNA.244-201ENST00000364484 109 ntBASIC3.85□□□□□ -1.79
CHRNA4P43681 RNU6-1134P-201ENST00000365156 101 ntBASIC3.85□□□□□ -1.79
CHRNA4P43681 MIR891A-201ENST00000401237 79 ntBASIC3.85□□□□□ -1.79
CHRNA4P43681 MIR1255A-201ENST00000408338 113 ntBASIC3.85□□□□□ -1.79
CHRNA4P43681 RNU2-32P-201ENST00000411193 191 ntBASIC3.85□□□□□ -1.79
CHRNA4P43681 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.85□□□□□ -1.79
CHRNA4P43681 RN7SL323P-201ENST00000494712 295 ntBASIC3.85□□□□□ -1.79
CHRNA4P43681 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.85□□□□□ -1.79
CHRNA4P43681 RNA5SP153-201ENST00000516498 76 ntBASIC3.85□□□□□ -1.79
CHRNA4P43681 AC026421.1-201ENST00000519101 163 ntBASIC3.85□□□□□ -1.79
CHRNA4P43681 MED28P6-201ENST00000558776 231 ntBASIC3.85□□□□□ -1.79
CHRNA4P43681 MIR4727-201ENST00000622232 55 ntBASIC3.85□□□□□ -1.79
CHRNA4P43681 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA4P43681 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA4P43681 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA4P43681 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA4P43681 AC004866.1-201ENST00000411748 78 ntBASIC3.84□□□□□ -1.79
CHRNA4P43681 MTATP6P21-201ENST00000440681 189 ntBASIC3.84□□□□□ -1.79
CHRNA4P43681 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.84□□□□□ -1.79
CHRNA4P43681 AC010531.2-201ENST00000465012 153 ntBASIC3.84□□□□□ -1.79
CHRNA4P43681 COX6CP6-201ENST00000490840 228 ntBASIC3.84□□□□□ -1.79
CHRNA4P43681 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
CHRNA4P43681 Vault.1-201ENST00000516474 102 ntBASIC3.84□□□□□ -1.79
CHRNA4P43681 RNA5SP309-201ENST00000516670 106 ntBASIC3.84□□□□□ -1.79
CHRNA4P43681 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.84□□□□□ -1.79
CHRNA4P43681 AL137849.1-201ENST00000604767 169 ntBASIC3.84□□□□□ -1.79
CHRNA4P43681 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA4P43681 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.84□□□□□ -1.8
CHRNA4P43681 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.83□□□□□ -1.8
CHRNA4P43681 AC006504.1-201ENST00000562493 3666 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CHRNA4P43681 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA4P43681 AL589743.1-201ENST00000551932 2712 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 RNU6-778P-201ENST00000363269 103 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 SNORA63.5-201ENST00000363548 123 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 RNU6-140P-201ENST00000384566 108 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 MIR518C-201ENST00000384822 101 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 MIR30B-201ENST00000384850 88 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 MIR624-201ENST00000385217 97 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CHRNA4P43681 AL365496.1-201ENST00000426885 215 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 Z75741.1-201ENST00000446793 314 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 RNU6-437P-201ENST00000459408 95 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 snoU13.22-201ENST00000459428 104 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.83□□□□□ -1.8
CHRNA4P43681 RNA5SP143-201ENST00000516936 115 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms