Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 AC109810.1-201ENST00000534066 224 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 MIR4724-201ENST00000579485 89 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFAP04085 MIR6868-201ENST00000611215 58 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 AC012314.7-201ENST00000619693 93 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 AC091953.5-201ENST00000622919 233 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDGFAP04085 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PDGFAP04085 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PDGFAP04085 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDGFAP04085 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.75□□□□□ -1.81
PDGFAP04085 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFAP04085 AL049781.1-201ENST00000623195 3585 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFAP04085 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFAP04085 AL159152.1-201ENST00000635019 2587 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFAP04085 MIR367-201ENST00000362299 68 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 RNU6-271P-201ENST00000363858 105 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 RNU6-959P-201ENST00000384671 107 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 MIR7-3-201ENST00000384898 110 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 AL139095.1-201ENST00000404326 391 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 RNU2-51P-201ENST00000410708 197 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 RPL23AP7-203ENST00000449021 469 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 CENPBD1P1-201ENST00000464061 469 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 RN7SL585P-201ENST00000470538 280 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.74□□□□□ -1.81
PDGFAP04085 MRPS36P2-201ENST00000512569 299 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 SCARNA17.1-201ENST00000516211 143 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 SCARNA17.2-201ENST00000516334 143 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 SCARNA11.3-201ENST00000517276 130 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 MIR548X2-201ENST00000579776 100 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 AC090616.3-201ENST00000582184 217 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFAP04085 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.74□□□□□ -1.81
PDGFAP04085 AC007179.3-201ENST00000604976 235 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 SCARNA17.4-201ENST00000614296 143 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 snoZ196.1-201ENST00000625269 89 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.74□□□□□ -1.81
PDGFAP04085 AC110079.1-202ENST00000635213 138 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 AC009093.8-201ENST00000641769 292 ntBASIC3.74□□□□□ -1.81
PDGFAP04085 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFAP04085 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.74□□□□□ -1.81
PDGFAP04085 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFAP04085 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.73□□□□□ -1.81
PDGFAP04085 RNU6-525P-201ENST00000363685 104 ntBASIC3.73□□□□□ -1.81
PDGFAP04085 RNA5SP139-201ENST00000364340 117 ntBASIC3.73□□□□□ -1.81
PDGFAP04085 RNU6-234P-201ENST00000365229 104 ntBASIC3.73□□□□□ -1.81
PDGFAP04085 SNORA9-201ENST00000384215 133 ntBASIC3.73□□□□□ -1.81
PDGFAP04085 RN7SKP156-201ENST00000410308 342 ntBASIC3.73□□□□□ -1.81
PDGFAP04085 HSPE1P13-201ENST00000451143 297 ntBASIC3.73□□□□□ -1.81
PDGFAP04085 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.73□□□□□ -1.81
PDGFAP04085 RNU7-170P-201ENST00000459303 61 ntBASIC3.73□□□□□ -1.81
PDGFAP04085 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.73□□□□□ -1.81
PDGFAP04085 MIR449C-201ENST00000516047 92 ntBASIC3.73□□□□□ -1.81
PDGFAP04085 RNU6-426P-201ENST00000516464 97 ntBASIC3.73□□□□□ -1.81
PDGFAP04085 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.73□□□□□ -1.81
PDGFAP04085 MIR5684-201ENST00000585074 65 ntBASIC3.73□□□□□ -1.81
PDGFAP04085 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFAP04085 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.73□□□□□ -1.81
PDGFAP04085 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFAP04085 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFAP04085 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFAP04085 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
PDGFAP04085 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFAP04085 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.73□□□□□ -1.81
PDGFAP04085 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PDGFAP04085 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFAP04085 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PDGFAP04085 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFAP04085 AP003122.5-201ENST00000527668 3766 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.72□□□□□ -1.81
PDGFAP04085 RNU6-22P-201ENST00000384355 107 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 RNU6-1274P-201ENST00000384557 107 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 Y_RNA.572-201ENST00000384757 98 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 MIR1179-201ENST00000408703 91 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.72□□□□□ -1.81
PDGFAP04085 AL121890.1-201ENST00000435457 205 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 AC245047.8-201ENST00000456455 284 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 RN7SL323P-201ENST00000494712 295 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 AC026403.1-201ENST00000518938 295 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 AC022616.8-201ENST00000533569 253 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 DNAJC19P2-201ENST00000593340 302 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 MIR548AY-201ENST00000617669 107 ntBASIC3.72□□□□□ -1.81
PDGFAP04085 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.72□□□□□ -1.81
PDGFAP04085 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFAP04085 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PDGFAP04085 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.71□□□□□ -1.81
PDGFAP04085 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PDGFAP04085 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.71□□□□□ -1.82
PDGFAP04085 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.71□□□□□ -1.82
PDGFAP04085 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PDGFAP04085 AC091564.4-201ENST00000533934 2194 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 Y_RNA.124-201ENST00000363339 93 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 SNORA20B-201ENST00000384220 132 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 MIR518C-201ENST00000384822 101 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 MIR569-201ENST00000385228 96 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 Y_RNA.586-201ENST00000391146 98 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 AL355796.1-201ENST00000406706 323 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms