Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MIR422A-201ENST00000362286 90 ntBASIC2.91□□□□□ -1.94
PROM1O43490 Y_RNA.16-201ENST00000362421 102 ntBASIC2.91□□□□□ -1.94
PROM1O43490 RNU6-1285P-201ENST00000363480 105 ntBASIC2.91□□□□□ -1.94
PROM1O43490 RNU6-1180P-201ENST00000364935 107 ntBASIC2.91□□□□□ -1.94
PROM1O43490 Y_RNA.478-201ENST00000384358 107 ntBASIC2.91□□□□□ -1.94
PROM1O43490 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.91□□□□□ -1.94
PROM1O43490 AP000705.1-201ENST00000454567 350 ntBASIC2.91□□□□□ -1.94
PROM1O43490 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.91□□□□□ -1.94
PROM1O43490 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.91□□□□□ -1.94
PROM1O43490 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.91□□□□□ -1.94
PROM1O43490 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.91□□□□□ -1.94
PROM1O43490 SCARNA24.2-201ENST00000516968 130 ntBASIC2.91□□□□□ -1.94
PROM1O43490 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.91□□□□□ -1.94
PROM1O43490 AC115990.1-201ENST00000526957 301 ntBASIC2.91□□□□□ -1.94
PROM1O43490 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.91□□□□□ -1.94
PROM1O43490 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.91□□□□□ -1.94
PROM1O43490 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
PROM1O43490 AC010900.2-201ENST00000604508 210 ntBASIC2.91□□□□□ -1.94
PROM1O43490 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.91□□□□□ -1.94
PROM1O43490 SNORD98-201ENST00000636377 67 ntBASIC2.91□□□□□ -1.94
PROM1O43490 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PROM1O43490 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PROM1O43490 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PROM1O43490 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
PROM1O43490 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PROM1O43490 SNORD81.1-201ENST00000363064 77 ntBASIC2.9□□□□□ -1.95
PROM1O43490 SNORA68.1-201ENST00000364537 132 ntBASIC2.9□□□□□ -1.95
PROM1O43490 RNU4-56P-201ENST00000364700 142 ntBASIC2.9□□□□□ -1.95
PROM1O43490 Y_RNA.416-201ENST00000384014 113 ntBASIC2.9□□□□□ -1.95
PROM1O43490 RNU6-1026P-201ENST00000384465 108 ntBASIC2.9□□□□□ -1.95
PROM1O43490 Y_RNA.518-201ENST00000384552 113 ntBASIC2.9□□□□□ -1.95
PROM1O43490 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
PROM1O43490 RNA5SP213-201ENST00000391031 106 ntBASIC2.9□□□□□ -1.95
PROM1O43490 MRPL35P1-201ENST00000404272 572 ntBASIC2.9□□□□□ -1.95
PROM1O43490 AC009310.1-201ENST00000414414 451 ntBASIC2.9□□□□□ -1.95
PROM1O43490 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.9□□□□□ -1.95
PROM1O43490 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.9□□□□□ -1.95
PROM1O43490 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.9□□□□□ -1.95
PROM1O43490 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.9□□□□□ -1.95
PROM1O43490 RNU6-1338P-201ENST00000516328 91 ntBASIC2.9□□□□□ -1.95
PROM1O43490 RNU6-567P-201ENST00000516746 107 ntBASIC2.9□□□□□ -1.95
PROM1O43490 RNU6-111P-201ENST00000517179 105 ntBASIC2.9□□□□□ -1.95
PROM1O43490 RPS15AP11-201ENST00000594193 385 ntBASIC2.9□□□□□ -1.95
PROM1O43490 AL078605.1-201ENST00000603529 500 ntBASIC2.9□□□□□ -1.95
PROM1O43490 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.9□□□□□ -1.95
PROM1O43490 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PROM1O43490 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PROM1O43490 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.89□□□□□ -1.95
PROM1O43490 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PROM1O43490 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PROM1O43490 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PROM1O43490 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PROM1O43490 MIR335-201ENST00000362173 94 ntBASIC2.89□□□□□ -1.95
PROM1O43490 RNU6-873P-201ENST00000363833 107 ntBASIC2.89□□□□□ -1.95
PROM1O43490 RNU6-281P-201ENST00000384212 103 ntBASIC2.89□□□□□ -1.95
PROM1O43490 RNU6-301P-201ENST00000384277 107 ntBASIC2.89□□□□□ -1.95
PROM1O43490 RNU6-102P-201ENST00000384485 104 ntBASIC2.89□□□□□ -1.95
PROM1O43490 Y_RNA.541-201ENST00000384640 113 ntBASIC2.89□□□□□ -1.95
PROM1O43490 MIR549A-201ENST00000385268 96 ntBASIC2.89□□□□□ -1.95
PROM1O43490 Y_RNA.581-201ENST00000391017 97 ntBASIC2.89□□□□□ -1.95
PROM1O43490 MIR208B-201ENST00000401172 77 ntBASIC2.89□□□□□ -1.95
PROM1O43490 RNA5SP274-201ENST00000410484 108 ntBASIC2.89□□□□□ -1.95
PROM1O43490 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.89□□□□□ -1.95
PROM1O43490 AC139712.2-201ENST00000424302 339 ntBASIC2.89□□□□□ -1.95
PROM1O43490 AC004383.1-201ENST00000438135 289 ntBASIC2.89□□□□□ -1.95
PROM1O43490 AC005002.2-201ENST00000438228 269 ntBASIC2.89□□□□□ -1.95
PROM1O43490 AC025750.2-201ENST00000442609 450 ntBASIC2.89□□□□□ -1.95
PROM1O43490 AL139109.1-201ENST00000455491 297 ntBASIC2.89□□□□□ -1.95
PROM1O43490 RN7SL20P-201ENST00000488827 297 ntBASIC2.89□□□□□ -1.95
PROM1O43490 AC006445.1-201ENST00000491925 405 ntBASIC2.89□□□□□ -1.95
PROM1O43490 GZMAP1-201ENST00000503054 631 ntBASIC2.89□□□□□ -1.95
PROM1O43490 SNORA31.6-201ENST00000516241 130 ntBASIC2.89□□□□□ -1.95
PROM1O43490 RNU5B-3P-201ENST00000516601 115 ntBASIC2.89□□□□□ -1.95
PROM1O43490 RN7SKP49-201ENST00000516675 260 ntBASIC2.89□□□□□ -1.95
PROM1O43490 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.89□□□□□ -1.95
PROM1O43490 AC022080.3-201ENST00000544433 482 ntBASIC2.89□□□□□ -1.95
PROM1O43490 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.89□□□□□ -1.95
PROM1O43490 MIR7106-201ENST00000612419 65 ntBASIC2.89□□□□□ -1.95
PROM1O43490 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.89□□□□□ -1.95
PROM1O43490 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PROM1O43490 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.88□□□□□ -1.95
PROM1O43490 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.88□□□□□ -1.95
PROM1O43490 ZNF204P-201ENST00000416749 2397 ntBASIC2.88□□□□□ -1.95
PROM1O43490 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PROM1O43490 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PROM1O43490 Y_RNA.65-201ENST00000362846 100 ntBASIC2.88□□□□□ -1.95
PROM1O43490 RNU6-137P-201ENST00000363680 108 ntBASIC2.88□□□□□ -1.95
PROM1O43490 SNORA5B-201ENST00000363786 132 ntBASIC2.88□□□□□ -1.95
PROM1O43490 RNU6-280P-201ENST00000364145 104 ntBASIC2.88□□□□□ -1.95
PROM1O43490 RNU6-21P-201ENST00000384710 107 ntBASIC2.88□□□□□ -1.95
PROM1O43490 SNORA26.3-201ENST00000391119 136 ntBASIC2.88□□□□□ -1.95
PROM1O43490 RNU4-30P-201ENST00000410245 143 ntBASIC2.88□□□□□ -1.95
PROM1O43490 RN7SKP284-201ENST00000411002 343 ntBASIC2.88□□□□□ -1.95
PROM1O43490 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.88□□□□□ -1.95
PROM1O43490 AC010095.1-201ENST00000443543 144 ntBASIC2.88□□□□□ -1.95
PROM1O43490 AIG1P1-201ENST00000503376 148 ntBASIC2.88□□□□□ -1.95
PROM1O43490 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.88□□□□□ -1.95
PROM1O43490 RN7SKP43-201ENST00000516173 320 ntBASIC2.88□□□□□ -1.95
PROM1O43490 SNORA25.14-201ENST00000516481 132 ntBASIC2.88□□□□□ -1.95
PROM1O43490 RNU7-110P-201ENST00000516891 62 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms