Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 CR383656.8-201ENST00000549046 145 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 MIR5695-201ENST00000579717 85 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 AC011471.1-201ENST00000585766 187 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 AC005296.1-201ENST00000616145 209 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 MIR3529-201ENST00000637713 78 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 MIR7153-201ENST00000637758 57 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AP003122.5-201ENST00000527668 3766 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 Y_RNA.76-201ENST00000362931 109 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 Y_RNA.319-201ENST00000365138 92 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 RNU6-326P-201ENST00000365480 107 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 Y_RNA.464-201ENST00000384282 110 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 Y_RNA.504-201ENST00000384481 104 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 PCNPP3-201ENST00000393579 471 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 RNU5A-5P-201ENST00000411054 116 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AC096638.1-201ENST00000444678 216 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 RNU7-120P-201ENST00000459334 63 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 S100A11P2-201ENST00000467589 312 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AC107393.1-201ENST00000512403 346 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 CBX3P4-201ENST00000538909 354 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AC019159.1-201ENST00000605094 187 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AC002064.3-201ENST00000623448 346 ntBASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HS3ST4Q9Y661 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 SNORD32A-201ENST00000364805 84 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 Y_RNA.286-201ENST00000364813 102 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 RNU6-662P-201ENST00000384253 104 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 Y_RNA.569-201ENST00000384749 103 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 EI24P2-201ENST00000397776 1076 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 WARS2P1-201ENST00000429678 537 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 AC087441.2-201ENST00000529141 262 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 AL162424.1-201ENST00000602325 221 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 AL356157.2-201ENST00000605122 111 ntBASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HS3ST4Q9Y661 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 SNORA25.1-201ENST00000362326 128 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 RNU6-740P-201ENST00000364734 105 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 RNU6-514P-201ENST00000384208 107 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 SNORA46-201ENST00000384762 135 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 AC074117.2-201ENST00000417130 397 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 RPL23AP95-201ENST00000426806 265 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 GPM6BP3-201ENST00000442797 145 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 AC073901.1-201ENST00000462471 408 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 Y_RNA.679-201ENST00000516416 91 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 SCARNA13-201ENST00000516672 275 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 RN7SKP49-201ENST00000516675 260 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 AC016256.1-201ENST00000547971 354 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 HSPE1P4-201ENST00000550617 308 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 AC027288.2-201ENST00000553028 243 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 UBL5P4-201ENST00000562584 236 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 MIR3133-201ENST00000583157 78 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 AC008739.2-201ENST00000597006 317 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 Z83818.1-201ENST00000603584 150 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 AL138963.2-201ENST00000605137 226 ntBASIC3.09□□□□□ -1.91
HS3ST4Q9Y661 AL035425.3-201ENST00000564206 4996 ntBASIC3.09□□□□□ -1.92
HS3ST4Q9Y661 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 RNU5B-2P-201ENST00000363036 113 ntBASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 MIR544A-201ENST00000384855 91 ntBASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 MIR10B-201ENST00000385011 110 ntBASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 RNA5SP213-201ENST00000391031 106 ntBASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 RNA5SP274-201ENST00000410484 108 ntBASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 RNU6-1001P-201ENST00000411265 100 ntBASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 Y_RNA.626-201ENST00000411288 95 ntBASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.08□□□□□ -1.92
HS3ST4Q9Y661 RPL31P41-201ENST00000477967 372 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms