Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 FAM35CP-201ENST00000554755 2470 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 AC005332.5-201ENST00000591222 2919 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 SNORD115-35-201ENST00000365122 82 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 RNY1P6-201ENST00000384193 109 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 SNORD61-201ENST00000384252 73 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 RPS26P8-201ENST00000393490 348 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 MRPL35P3-201ENST00000421557 364 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 AC244098.2-201ENST00000422068 99 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 FTLP19-201ENST00000433300 394 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 HMGN2P9-201ENST00000476875 229 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 RN7SL604P-201ENST00000492589 296 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 RNU6-1270P-201ENST00000517128 108 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 AC021443.1-201ENST00000604478 211 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 U4atac.1-201ENST00000618345 95 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 AC068724.3-201ENST00000625906 87 ntBASIC5.4□□□□□ -1.54
TRIM35Q9UPQ4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM35Q9UPQ4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
TRIM35Q9UPQ4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM35Q9UPQ4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM35Q9UPQ4 AC016588.2-201ENST00000632484 3021 ntBASIC5.4□□□□□ -1.55
TRIM35Q9UPQ4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 RNU6-888P-201ENST00000363010 101 ntBASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 SNORD77.3-201ENST00000391113 65 ntBASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 BTF3P4-201ENST00000418852 495 ntBASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 HMGB1P22-201ENST00000505315 124 ntBASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 AC021739.1-201ENST00000559631 174 ntBASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 MIR6798-201ENST00000612887 67 ntBASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 SNX18P1Y-201ENST00000616231 511 ntBASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM35Q9UPQ4 AC092435.4-201ENST00000623012 4159 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 LINC01355-201ENST00000566551 5444 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 Y_RNA.40-201ENST00000362645 93 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 Y_RNA.190-201ENST00000363964 101 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 RNU6-944P-201ENST00000364023 107 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 RNA5SP479-201ENST00000364858 117 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 SNORA51.4-201ENST00000364993 124 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 RNU6-117P-201ENST00000365415 107 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 SNORD24-201ENST00000383884 75 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 SNORA1.3-201ENST00000384676 136 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 RNU6-1197P-201ENST00000391183 107 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 RNA5SP146-201ENST00000410743 123 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 snoU13.4-201ENST00000458916 104 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 snoU13.24-201ENST00000458998 104 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 SNRPGP3-201ENST00000469405 227 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 RPS26P28-201ENST00000470806 348 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 RN7SL807P-201ENST00000470923 297 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 RN7SKP57-201ENST00000517248 293 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 AC007224.1-201ENST00000564410 144 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 SNRPGP15-201ENST00000600149 222 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 AC006065.5-201ENST00000623427 349 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 AC006160.2-201ENST00000637708 154 ntBASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRIM35Q9UPQ4 A2MP1-204ENST00000566278 4130 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 Y_RNA.96-201ENST00000363092 109 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 RNU6-178P-201ENST00000384631 104 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 EIF4A1P3-201ENST00000411521 244 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 RPL23AP46-201ENST00000438548 490 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 RNU2-11P-201ENST00000459191 187 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 snoU13.14-201ENST00000459372 104 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 PPBPP1-201ENST00000510807 373 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 RNU7-143P-201ENST00000516781 65 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 MIR3160-1-201ENST00000577972 85 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 MIR5684-201ENST00000585074 65 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 AC091152.3-201ENST00000604227 325 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 JPX_2.1-201ENST00000614161 69 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 U6.73-201ENST00000619194 103 ntBASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM35Q9UPQ4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms