Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 AC023824.2-201ENST00000566185 400 ntBASIC2.74□□□□□ -1.97
NMD3Q96D46 MIR5680-201ENST00000577577 84 ntBASIC2.74□□□□□ -1.97
NMD3Q96D46 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.74□□□□□ -1.97
NMD3Q96D46 MIR5004-201ENST00000579078 107 ntBASIC2.74□□□□□ -1.97
NMD3Q96D46 MIR4680-201ENST00000580906 66 ntBASIC2.74□□□□□ -1.97
NMD3Q96D46 UBL5P2-201ENST00000583788 219 ntBASIC2.74□□□□□ -1.97
NMD3Q96D46 AC124312.5-201ENST00000604451 268 ntBASIC2.74□□□□□ -1.97
NMD3Q96D46 YPEL5P2-201ENST00000605553 359 ntBASIC2.74□□□□□ -1.97
NMD3Q96D46 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NMD3Q96D46 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NMD3Q96D46 AL035425.3-201ENST00000564206 4996 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 SNORA63.1-201ENST00000362493 131 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 Y_RNA.179-201ENST00000363844 90 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 RNU6-450P-201ENST00000364654 107 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 SNORA18.3-201ENST00000384122 132 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NMD3Q96D46 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NMD3Q96D46 Y_RNA.645-201ENST00000391229 102 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 SNORA48.7-201ENST00000391302 135 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 RNU2-25P-201ENST00000411041 191 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 Z82209.1-201ENST00000422141 2135 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.73□□□□□ -1.97
NMD3Q96D46 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.73□□□□□ -1.97
NMD3Q96D46 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 RNU6-327P-201ENST00000516270 127 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 AP002770.2-201ENST00000543613 532 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.73□□□□□ -1.97
NMD3Q96D46 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.73□□□□□ -1.97
NMD3Q96D46 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.73□□□□□ -1.97
NMD3Q96D46 AC104695.3-201ENST00000604052 296 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 AL360085.1-201ENST00000604713 532 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 AC012314.7-201ENST00000619693 93 ntBASIC2.73□□□□□ -1.97
NMD3Q96D46 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
NMD3Q96D46 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.73□□□□□ -1.97
NMD3Q96D46 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.72□□□□□ -1.97
NMD3Q96D46 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NMD3Q96D46 AC000403.1-201ENST00000613696 3585 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
NMD3Q96D46 Y_RNA.27-201ENST00000362540 103 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 RNU4-50P-201ENST00000364361 141 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 RNA5SP72-201ENST00000364442 117 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 SNORA54-201ENST00000384281 123 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 RNY3P4-201ENST00000384428 101 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 SNORD15B-201ENST00000384714 146 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 RNU6-1001P-201ENST00000411265 100 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 AC010095.1-201ENST00000443543 144 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 AC093852.1-201ENST00000503587 266 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.72□□□□□ -1.97
NMD3Q96D46 AC022616.4-201ENST00000522985 181 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 CBX3P7-201ENST00000532876 502 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 AC018630.3-201ENST00000542637 96 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 MIR1254-2-201ENST00000579553 63 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 AC125232.2-201ENST00000592457 143 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 PART1_1.1-201ENST00000611761 217 ntBASIC2.72□□□□□ -1.97
NMD3Q96D46 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
NMD3Q96D46 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NMD3Q96D46 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NMD3Q96D46 RNA5SP361-201ENST00000362686 118 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 RNU1-35P-201ENST00000362782 153 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 VTRNA1-1-201ENST00000363120 99 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 RNU1-23P-201ENST00000363361 144 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 RNU6-708P-201ENST00000384217 107 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 Y_RNA.455-201ENST00000384230 98 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 RNU6-793P-201ENST00000384233 104 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 RNU6-1026P-201ENST00000384465 108 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 MIR34B-201ENST00000385076 84 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NMD3Q96D46 RNA5SP213-201ENST00000391031 106 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 RNU6-823P-201ENST00000391042 103 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 Y_RNA.595-201ENST00000410403 105 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.71□□□□□ -1.98
NMD3Q96D46 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.71□□□□□ -1.98
NMD3Q96D46 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.71□□□□□ -1.98
NMD3Q96D46 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.71□□□□□ -1.98
NMD3Q96D46 RN7SL807P-201ENST00000470923 297 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 RN7SL504P-201ENST00000494496 287 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.71□□□□□ -1.98
NMD3Q96D46 RNU6-764P-201ENST00000516396 105 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 Y_RNA.683-201ENST00000516508 93 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 SNORA31.15-201ENST00000516771 132 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 RNU6-1137P-201ENST00000517073 99 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 AC109329.2-201ENST00000519658 482 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.71□□□□□ -1.98
NMD3Q96D46 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.71□□□□□ -1.98
NMD3Q96D46 AL390123.1-201ENST00000603216 237 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NMD3Q96D46 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.71□□□□□ -1.98
NMD3Q96D46 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.71□□□□□ -1.98
NMD3Q96D46 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.7□□□□□ -1.98
NMD3Q96D46 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NMD3Q96D46 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
NMD3Q96D46 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.7□□□□□ -1.98
NMD3Q96D46 RNU1-62P-201ENST00000362599 164 ntBASIC2.7□□□□□ -1.98
NMD3Q96D46 RNU1-76P-201ENST00000362903 159 ntBASIC2.7□□□□□ -1.98
NMD3Q96D46 RNU6-727P-201ENST00000363592 107 ntBASIC2.7□□□□□ -1.98
NMD3Q96D46 RNU6-743P-201ENST00000364151 106 ntBASIC2.7□□□□□ -1.98
NMD3Q96D46 RNU6-234P-201ENST00000365229 104 ntBASIC2.7□□□□□ -1.98
NMD3Q96D46 RNU6-926P-201ENST00000384075 107 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms