Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TTC9BQ8N6N2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TTC9BQ8N6N2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.31□□□□□ -1.88
TTC9BQ8N6N2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 Y_RNA.127-201ENST00000363386 109 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 RNU4-17P-201ENST00000365598 141 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 RNU6-1145P-201ENST00000384246 107 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 MIR549A-201ENST00000385268 96 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 EIF1AXP1-201ENST00000419267 435 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 CR769767.1-201ENST00000436337 346 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 AL137159.1-201ENST00000452808 512 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 RNU6-58P-201ENST00000517143 103 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 MIR548X2-201ENST00000579776 100 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 SCARNA4-202ENST00000625402 129 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 MIR3658-201ENST00000636291 56 ntBASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TTC9BQ8N6N2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 SRP72P2-201ENST00000344851 1979 ntBASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 Y_RNA.23-201ENST00000362496 106 ntBASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 RNU6-1272P-201ENST00000362776 107 ntBASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 Y_RNA.101-201ENST00000363154 102 ntBASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 RNU6-312P-201ENST00000364629 107 ntBASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 RNU6-159P-201ENST00000391080 106 ntBASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 AC097462.2-201ENST00000504623 481 ntBASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 Y_RNA.686-201ENST00000516548 134 ntBASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 AC022441.3-201ENST00000605737 136 ntBASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 SNORA43.4-201ENST00000629559 138 ntBASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TTC9BQ8N6N2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 DEFB108F-201ENST00000344638 222 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 FTLP6-201ENST00000355274 422 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 RNU6-873P-201ENST00000363833 107 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 RNU6-898P-201ENST00000365627 104 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AC010154.1-201ENST00000425857 269 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 ARF4P2-201ENST00000430209 526 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 RNU6-155P-201ENST00000516347 100 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AC011602.1-201ENST00000546484 331 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 MED28P6-201ENST00000558776 231 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AC090132.2-201ENST00000615881 347 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AC091932.3-201ENST00000624223 323 ntBASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TTC9BQ8N6N2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 SNORD56.1-201ENST00000362913 68 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 Y_RNA.75-201ENST00000362927 97 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 RNU5B-2P-201ENST00000363036 113 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 RNU6-741P-201ENST00000383889 107 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 SNORD116-14-201ENST00000383894 92 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 SNORD116-17-201ENST00000383929 92 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 SNORD116-15-201ENST00000384445 92 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 SNORD116-20-201ENST00000384529 92 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 SNORD116-19-201ENST00000384729 92 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 MIR634-201ENST00000385208 97 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 MIR591-201ENST00000385290 95 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 RNU6-1245P-201ENST00000411130 106 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 RAB28P5-201ENST00000427490 651 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC025750.2-201ENST00000442609 450 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms