Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 Y_RNA.570-201ENST00000384750 101 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 AC009237.7-201ENST00000447357 229 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 RPL21P10-201ENST00000463521 490 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 AC091179.3-201ENST00000474761 144 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 AC006483.1-201ENST00000487308 313 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 RNU6-344P-201ENST00000516635 111 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 SCARNA13-201ENST00000516672 275 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 SNORA70.18-201ENST00000516696 98 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 SCARNA3-201ENST00000517097 143 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 AC005828.6-201ENST00000606610 232 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 NDUFB4P4-201ENST00000404822 243 ntBASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 U6atac.2-201ENST00000408644 118 ntBASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 AC004386.2-201ENST00000441858 148 ntBASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 RPS12P18-201ENST00000442381 270 ntBASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 RN7SL807P-201ENST00000470923 297 ntBASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NPAS4Q8IUM7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NPAS4Q8IUM7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NPAS4Q8IUM7 RNU6-1290P-201ENST00000362957 109 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 RNU6-1117P-201ENST00000384525 104 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 MIR549A-201ENST00000385268 96 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 RNA5SP120-201ENST00000410900 112 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 RPL23AP36-201ENST00000413895 458 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 TRBV12-2-201ENST00000489763 344 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 RNU2-27P-201ENST00000516185 142 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 RN7SKP57-201ENST00000517248 293 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 AC018448.1-201ENST00000552843 316 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 AC005000.2-201ENST00000605468 310 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 AC069294.1-201ENST00000608397 350 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 AC073349.3-201ENST00000617616 186 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 AC006001.4-201ENST00000622243 395 ntBASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS4Q8IUM7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 SNORA18.2-201ENST00000383865 132 ntBASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 AC126124.2-201ENST00000413542 321 ntBASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 AC024067.1-201ENST00000426199 223 ntBASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 AC005326.1-201ENST00000429197 123 ntBASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 SNORD2.1-201ENST00000458762 69 ntBASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 CKS1BP2-201ENST00000497342 240 ntBASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 MIR5047-201ENST00000579212 100 ntBASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 AC105245.1-201ENST00000581934 244 ntBASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 MIR3199-1-201ENST00000582434 88 ntBASIC3.89□□□□□ -1.79
NPAS4Q8IUM7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 RNU4-35P-201ENST00000362588 141 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 RNU6-727P-201ENST00000363592 107 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 SNORA68.1-201ENST00000364537 132 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 Y_RNA.331-201ENST00000365267 102 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 RNU6-1130P-201ENST00000365434 107 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 SNORD21-201ENST00000383953 95 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 MIR1294-201ENST00000408503 142 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 RNU2-51P-201ENST00000410708 197 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 DBIP2-201ENST00000419076 262 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 POLR2KP2-201ENST00000438155 177 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 RNU2-44P-201ENST00000516795 194 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 RNU6-586P-201ENST00000517265 104 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 AC108706.1-201ENST00000611053 297 ntBASIC3.88□□□□□ -1.79
NPAS4Q8IUM7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NPAS4Q8IUM7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms