Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 MIR548BB-201ENST00000626714 66 ntBASIC4.68□□□□□ -1.66
TRAF7Q6Q0C0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAF7Q6Q0C0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAF7Q6Q0C0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAF7Q6Q0C0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 AC007496.3-201ENST00000624987 3443 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 RNU1-62P-201ENST00000362599 164 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 SNORA31-201ENST00000362607 130 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 RNU6-170P-201ENST00000362832 104 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 Y_RNA.213-201ENST00000364178 111 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 Y_RNA.361-201ENST00000365515 120 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 DYNLT3P1-201ENST00000378574 347 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 SNORA26.3-201ENST00000391119 136 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 HMGN2P10-201ENST00000448085 265 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 RNA5SP246-201ENST00000458909 119 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 AC007215.1-201ENST00000464893 276 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 RNU6-581P-201ENST00000516214 105 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 RNA5SP143-201ENST00000516936 115 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 RPL23AP97-201ENST00000568955 471 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 AC091905.2-201ENST00000623143 306 ntBASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAF7Q6Q0C0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 Y_RNA.415-201ENST00000384012 112 ntBASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 MIR195-201ENST00000385194 87 ntBASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 MIR670-201ENST00000390142 98 ntBASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 CRYBB2P1-203ENST00000415709 538 ntBASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 AC019205.3-201ENST00000424573 156 ntBASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 RPS29P7-201ENST00000439662 171 ntBASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 RNU2-11P-201ENST00000459191 187 ntBASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 IFITM8P-201ENST00000522529 394 ntBASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 MTND6P33-201ENST00000571794 183 ntBASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 AC008507.4-201ENST00000585464 127 ntBASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAF7Q6Q0C0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
TRAF7Q6Q0C0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
TRAF7Q6Q0C0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
TRAF7Q6Q0C0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRAF7Q6Q0C0 AC015813.6-201ENST00000624409 5808 ntBASIC4.65□□□□□ -1.66
TRAF7Q6Q0C0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRAF7Q6Q0C0 RNU6-633P-201ENST00000362612 103 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 Y_RNA.191-201ENST00000363972 113 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 RNY1P4-201ENST00000384595 115 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 MIR554-201ENST00000384874 96 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 HMGB1P37-201ENST00000439613 609 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 AC006517.1-201ENST00000480485 328 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 AC093259.1-201ENST00000509755 300 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 AC021739.1-201ENST00000559631 174 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 AC090897.2-201ENST00000581715 130 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 U7.4-201ENST00000614961 63 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 MIR8069-1-201ENST00000616627 86 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 MIR8069-2-201ENST00000621412 86 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 AC002543.1-201ENST00000299783 1954 ntBASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.65□□□□□ -1.67
TRAF7Q6Q0C0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 SNORA71.3-201ENST00000362582 128 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 MIR548D2-201ENST00000384955 97 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 MIR759-201ENST00000390224 91 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 AC099548.1-201ENST00000421443 426 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 AP000873.1-201ENST00000463987 400 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 MIR3136-201ENST00000583498 78 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 AL365205.2-201ENST00000594586 68 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 AC073308.1-201ENST00000623696 305 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 MIR3199-2-201ENST00000636243 86 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 AL133383.2-201ENST00000622958 2336 ntBASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAF7Q6Q0C0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms