Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 MIR634-201ENST00000385208 97 ntBASIC3.44□□□□□ -1.86
SSRP1Q08945 MIR549A-201ENST00000385268 96 ntBASIC3.44□□□□□ -1.86
SSRP1Q08945 AL079342.1-201ENST00000401460 267 ntBASIC3.44□□□□□ -1.86
SSRP1Q08945 AC140059.1-201ENST00000489238 361 ntBASIC3.44□□□□□ -1.86
SSRP1Q08945 AC025465.3-201ENST00000510570 311 ntBASIC3.44□□□□□ -1.86
SSRP1Q08945 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.44□□□□□ -1.86
SSRP1Q08945 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.44□□□□□ -1.86
SSRP1Q08945 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSRP1Q08945 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.43□□□□□ -1.86
SSRP1Q08945 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.43□□□□□ -1.86
SSRP1Q08945 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSRP1Q08945 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSRP1Q08945 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.43□□□□□ -1.86
SSRP1Q08945 Y_RNA.222-201ENST00000364264 102 ntBASIC3.43□□□□□ -1.86
SSRP1Q08945 RNU6-806P-201ENST00000365147 105 ntBASIC3.43□□□□□ -1.86
SSRP1Q08945 SNORA48.2-201ENST00000390926 124 ntBASIC3.43□□□□□ -1.86
SSRP1Q08945 MIR1289-1-201ENST00000408836 144 ntBASIC3.43□□□□□ -1.86
SSRP1Q08945 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.43□□□□□ -1.86
SSRP1Q08945 RPL30P4-201ENST00000429309 333 ntBASIC3.43□□□□□ -1.86
SSRP1Q08945 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.43□□□□□ -1.86
SSRP1Q08945 LINC01399-202ENST00000458450 244 ntBASIC3.43□□□□□ -1.86
SSRP1Q08945 RPS29P2-201ENST00000479278 136 ntBASIC3.43□□□□□ -1.86
SSRP1Q08945 SCARNA3-201ENST00000517097 143 ntBASIC3.43□□□□□ -1.86
SSRP1Q08945 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.43□□□□□ -1.86
SSRP1Q08945 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.43□□□□□ -1.86
SSRP1Q08945 AC023824.2-201ENST00000566185 400 ntBASIC3.43□□□□□ -1.86
SSRP1Q08945 AC107871.2-201ENST00000612894 502 ntBASIC3.43□□□□□ -1.86
SSRP1Q08945 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.43□□□□□ -1.86
SSRP1Q08945 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.43□□□□□ -1.86
SSRP1Q08945 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSRP1Q08945 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.42□□□□□ -1.86
SSRP1Q08945 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSRP1Q08945 Y_RNA.26-201ENST00000362539 101 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 Y_RNA.111-201ENST00000363248 100 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 Y_RNA.179-201ENST00000363844 90 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 SNORD21-201ENST00000383953 95 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 RNU6-793P-201ENST00000384233 104 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 U6atac.2-201ENST00000408644 118 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 Y_RNA.595-201ENST00000410403 105 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.42□□□□□ -1.86
SSRP1Q08945 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.42□□□□□ -1.86
SSRP1Q08945 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.42□□□□□ -1.86
SSRP1Q08945 AC010095.1-201ENST00000443543 144 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 Y_RNA.683-201ENST00000516508 93 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 CYCSP23-201ENST00000519781 313 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 AP003733.2-201ENST00000529409 171 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.42□□□□□ -1.86
SSRP1Q08945 MIR3199-1-201ENST00000582434 88 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 AC010620.2-201ENST00000600135 313 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 AC005562.2-201ENST00000618264 111 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 AC090517.3-201ENST00000625170 141 ntBASIC3.42□□□□□ -1.86
SSRP1Q08945 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
SSRP1Q08945 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSRP1Q08945 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.42□□□□□ -1.86
SSRP1Q08945 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.42□□□□□ -1.86
SSRP1Q08945 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSRP1Q08945 RNU1-62P-201ENST00000362599 164 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 Y_RNA.105-201ENST00000363182 111 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 Y_RNA.461-201ENST00000384263 103 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 RNU6-505P-201ENST00000384427 107 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 AC022018.1-201ENST00000430685 241 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 AC007395.1-201ENST00000451333 677 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.41□□□□□ -1.86
SSRP1Q08945 SNORA59A-201ENST00000459326 152 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 AC091179.1-201ENST00000461606 579 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 RNA5SP341-201ENST00000516261 117 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 MIR376A1-201ENST00000616574 68 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 U6.104-201ENST00000637979 90 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 AL079305.1-201ENST00000623159 3008 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 MTND5P35-201ENST00000557537 1720 ntBASIC3.41□□□□□ -1.86
SSRP1Q08945 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SSRP1Q08945 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
SSRP1Q08945 LINC02555-201ENST00000563933 1951 ntBASIC3.4□□□□□ -1.86
SSRP1Q08945 RNU1-72P-201ENST00000362976 153 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 Y_RNA.143-201ENST00000363520 106 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSRP1Q08945 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.4□□□□□ -1.87
SSRP1Q08945 SNORA18.3-201ENST00000384122 132 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 MIR128-1-201ENST00000384921 82 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 MIR218-1-201ENST00000384999 110 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.4□□□□□ -1.87
SSRP1Q08945 MIR1302-6-201ENST00000408466 90 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 RNU6-121P-201ENST00000410525 99 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 AC027124.2-201ENST00000428249 105 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.4□□□□□ -1.87
SSRP1Q08945 PCNPP5-201ENST00000452246 481 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.4□□□□□ -1.87
SSRP1Q08945 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.4□□□□□ -1.87
SSRP1Q08945 SNORA40.9-201ENST00000515895 93 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 HSPE1P18-201ENST00000517602 280 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.4□□□□□ -1.87
SSRP1Q08945 AC136932.1-201ENST00000574771 208 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 AC105245.1-201ENST00000581934 244 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 AC078899.3-201ENST00000599065 212 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 AL162274.2-201ENST00000614406 332 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 TCL6_2.1-201ENST00000615162 119 ntBASIC3.4□□□□□ -1.87
SSRP1Q08945 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSRP1Q08945 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms