Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 SCARNA24.2-201ENST00000516968 130 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 AC013412.1-201ENST00000610687 192 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.39□□□□□ -1.87
HERVK_113P62684 AC141273.2-201ENST00000618989 130 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HERVK_113P62684 AC008264.2-201ENST00000610193 3731 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.39□□□□□ -1.87
HERVK_113P62684 AC002543.1-201ENST00000299783 1954 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HERVK_113P62684 Y_RNA.16-201ENST00000362421 102 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 RNU6-1026P-201ENST00000384465 108 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 RNU6-159P-201ENST00000391080 106 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 MIR548H3-201ENST00000408771 118 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 RNU6-1001P-201ENST00000411265 100 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 AL358075.3-201ENST00000426289 226 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 AC087499.2-201ENST00000432861 149 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 AP000705.1-201ENST00000454567 350 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 AL031183.1-201ENST00000457667 207 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.38□□□□□ -1.87
HERVK_113P62684 RNU6-1198P-201ENST00000516904 67 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 SNORD19.2-201ENST00000516978 73 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.38□□□□□ -1.87
HERVK_113P62684 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
HERVK_113P62684 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HERVK_113P62684 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HERVK_113P62684 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.38□□□□□ -1.87
HERVK_113P62684 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HERVK_113P62684 AC010889.1-201ENST00000566193 2666 ntBASIC3.38□□□□□ -1.87
HERVK_113P62684 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HERVK_113P62684 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HERVK_113P62684 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HERVK_113P62684 RNU4-82P-201ENST00000362443 140 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 RNU6-281P-201ENST00000384212 103 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 Y_RNA.478-201ENST00000384358 107 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 RNU6-748P-201ENST00000384648 107 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 RNA5SP213-201ENST00000391031 106 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 MRPL35P1-201ENST00000404272 572 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 AC063976.3-201ENST00000426849 329 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.37□□□□□ -1.87
HERVK_113P62684 AC092185.1-201ENST00000491371 97 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 RNU6-1338P-201ENST00000516328 91 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 RN7SKP49-201ENST00000516675 260 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 RNU6-111P-201ENST00000517179 105 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 AC115990.1-201ENST00000526957 301 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 AC079600.2-201ENST00000550076 130 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 MIR3945-201ENST00000581853 98 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.37□□□□□ -1.87
HERVK_113P62684 AL078605.1-201ENST00000603529 500 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 AC010900.2-201ENST00000604508 210 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 SNORD98-201ENST00000636377 67 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
HERVK_113P62684 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
HERVK_113P62684 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.37□□□□□ -1.87
HERVK_113P62684 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HERVK_113P62684 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.36□□□□□ -1.87
HERVK_113P62684 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HERVK_113P62684 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HERVK_113P62684 SNORA14A-201ENST00000364773 135 ntBASIC3.36□□□□□ -1.87
HERVK_113P62684 SNORA9.2-201ENST00000365361 133 ntBASIC3.36□□□□□ -1.87
HERVK_113P62684 Y_RNA.416-201ENST00000384014 113 ntBASIC3.36□□□□□ -1.87
HERVK_113P62684 Y_RNA.518-201ENST00000384552 113 ntBASIC3.36□□□□□ -1.87
HERVK_113P62684 Y_RNA.541-201ENST00000384640 113 ntBASIC3.36□□□□□ -1.87
HERVK_113P62684 MIR549A-201ENST00000385268 96 ntBASIC3.36□□□□□ -1.87
HERVK_113P62684 AC009310.1-201ENST00000414414 451 ntBASIC3.36□□□□□ -1.87
HERVK_113P62684 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.36□□□□□ -1.87
HERVK_113P62684 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.36□□□□□ -1.87
HERVK_113P62684 RNU5B-3P-201ENST00000516601 115 ntBASIC3.36□□□□□ -1.87
HERVK_113P62684 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HERVK_113P62684 IGHVIII-44-202ENST00000636235 289 ntBASIC3.36□□□□□ -1.87
HERVK_113P62684 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
HERVK_113P62684 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HERVK_113P62684 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HERVK_113P62684 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
HERVK_113P62684 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.35□□□□□ -1.87
HERVK_113P62684 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HERVK_113P62684 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HERVK_113P62684 SNORD81.1-201ENST00000363064 77 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 RNU6-137P-201ENST00000363680 108 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 RNU4-56P-201ENST00000364700 142 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 RNU6-102P-201ENST00000384485 104 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 Y_RNA.581-201ENST00000391017 97 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.35□□□□□ -1.87
HERVK_113P62684 AC139712.2-201ENST00000424302 339 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.35□□□□□ -1.87
HERVK_113P62684 AC004383.1-201ENST00000438135 289 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 GZMAP1-201ENST00000503054 631 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 AIG1P1-201ENST00000503376 148 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 RNU6-567P-201ENST00000516746 107 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.35□□□□□ -1.87
HERVK_113P62684 RPS15AP11-201ENST00000594193 385 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HERVK_113P62684 AC009487.2-201ENST00000420969 6821 ntBASIC3.35□□□□□ -1.87
HERVK_113P62684 ZNF204P-201ENST00000416749 2397 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.34□□□□□ -1.87
HERVK_113P62684 MIR335-201ENST00000362173 94 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 RNU6-873P-201ENST00000363833 107 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 RNU6-280P-201ENST00000364145 104 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms