Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPRAP18433 EIF4BP1-201ENST00000554881 351 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 MIR3923-201ENST00000579521 83 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 HMGN2P15-201ENST00000585707 270 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 AC069294.1-201ENST00000608397 350 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 MIR3199-2-201ENST00000636243 86 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PTPRAP18433 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPRAP18433 AC010332.2-201ENST00000613083 1904 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTPRAP18433 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPRAP18433 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
PTPRAP18433 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PTPRAP18433 AL672296.1-201ENST00000427780 2158 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPRAP18433 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPRAP18433 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPRAP18433 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTPRAP18433 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTPRAP18433 RNU4-10P-201ENST00000364383 140 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 Y_RNA.261-201ENST00000364631 102 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 SNORD20-201ENST00000384550 80 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 SNORA26.5-201ENST00000391215 123 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 AL133475.1-201ENST00000404414 305 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPRAP18433 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.96□□□□□ -1.78
PTPRAP18433 AC006445.2-201ENST00000510061 472 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 RNU7-121P-201ENST00000516604 62 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 AC021269.2-201ENST00000532318 330 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 AC025946.2-201ENST00000603398 234 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 AL110115.1-201ENST00000614396 364 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 AL078604.3-201ENST00000615580 211 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.96□□□□□ -1.78
PTPRAP18433 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTPRAP18433 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
PTPRAP18433 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PTPRAP18433 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPRAP18433 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPRAP18433 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPRAP18433 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTPRAP18433 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
PTPRAP18433 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PTPRAP18433 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPRAP18433 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
PTPRAP18433 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPRAP18433 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPRAP18433 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPRAP18433 AC018555.1-201ENST00000567548 1980 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPRAP18433 SNORD87-201ENST00000364849 89 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 RNU4-11P-201ENST00000365287 132 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 SNORA40-201ENST00000388090 126 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 RNU4-47P-201ENST00000410876 114 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPRAP18433 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPRAP18433 AC146507.2-201ENST00000460608 476 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 RPL31P41-201ENST00000477967 372 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 VWA8P1-201ENST00000510889 176 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 RN7SKP164-201ENST00000516138 266 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 SNORA25.12-201ENST00000516202 82 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 AC136628.3-201ENST00000521868 290 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPRAP18433 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPRAP18433 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPRAP18433 MIR4744-201ENST00000581563 82 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 AL034555.1-201ENST00000604816 211 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 AC134026.1-201ENST00000623249 2239 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPRAP18433 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPRAP18433 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPRAP18433 AF127577.6-201ENST00000623352 2191 ntBASIC3.95□□□□□ -1.78
PTPRAP18433 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPRAP18433 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPRAP18433 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPRAP18433 AC004944.1-201ENST00000517807 3059 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPRAP18433 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PTPRAP18433 snoU2_19.4-201ENST00000364329 80 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 RNU6-578P-201ENST00000390980 103 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 RNA5SP239-201ENST00000410218 129 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 AC004866.1-201ENST00000411748 78 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 CYCSP48-201ENST00000417124 323 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPRAP18433 RNA5SP310-201ENST00000459084 116 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 RPL27AP5-201ENST00000469428 449 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 AC026333.2-201ENST00000542164 106 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 AC105137.2-201ENST00000569073 466 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 MIR4431-201ENST00000579990 94 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 AL162274.2-201ENST00000614406 332 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 AC013791.1-201ENST00000616619 62 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 MIR6852-201ENST00000621699 66 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 AC018692.3-201ENST00000623929 123 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPRAP18433 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTPRAP18433 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTPRAP18433 TNPO1P3-201ENST00000436471 2662 ntBASIC3.94□□□□□ -1.78
PTPRAP18433 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PTPRAP18433 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PTPRAP18433 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTPRAP18433 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms