Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC105245.1-201ENST00000581934 244 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 AL020997.2-201ENST00000602607 184 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 RNU6-91P-201ENST00000607774 107 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.6□□□□□ -1.67
ACTN4O43707 AC069200.1-201ENST00000609511 323 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 AC073308.1-201ENST00000623696 305 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 AC011944.2-201ENST00000624440 683 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTN4O43707 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.6□□□□□ -1.67
ACTN4O43707 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ACTN4O43707 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.6□□□□□ -1.67
ACTN4O43707 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTN4O43707 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ACTN4O43707 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.59□□□□□ -1.67
ACTN4O43707 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
ACTN4O43707 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.59□□□□□ -1.67
ACTN4O43707 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
ACTN4O43707 RNU6-50P-201ENST00000362356 103 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 RNU6-1113P-201ENST00000384348 107 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 RNU6-748P-201ENST00000384648 107 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 RNA5SP127-201ENST00000411051 133 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 AL645939.1-201ENST00000453429 797 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 AL441985.1-201ENST00000457727 251 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 RN7SL303P-201ENST00000469773 251 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 SNORD77.4-201ENST00000516158 81 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 MIR4330-201ENST00000579077 105 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 MIR5684-201ENST00000585074 65 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.59□□□□□ -1.67
ACTN4O43707 AC097639.2-201ENST00000603159 172 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 AC114781.5-201ENST00000615297 108 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 uc_338.4-201ENST00000616635 176 ntBASIC4.59□□□□□ -1.67
ACTN4O43707 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ACTN4O43707 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
ACTN4O43707 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACTN4O43707 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.58□□□□□ -1.68
ACTN4O43707 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACTN4O43707 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ACTN4O43707 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.58□□□□□ -1.68
ACTN4O43707 Y_RNA.544-201ENST00000384650 113 ntBASIC4.58□□□□□ -1.68
ACTN4O43707 Y_RNA.549-201ENST00000384657 102 ntBASIC4.58□□□□□ -1.68
ACTN4O43707 MIR570-201ENST00000384917 97 ntBASIC4.58□□□□□ -1.68
ACTN4O43707 MIR624-201ENST00000385217 97 ntBASIC4.58□□□□□ -1.68
ACTN4O43707 AL353705.1-201ENST00000433468 480 ntBASIC4.58□□□□□ -1.68
ACTN4O43707 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.58□□□□□ -1.68
ACTN4O43707 AF228730.3-201ENST00000436691 102 ntBASIC4.58□□□□□ -1.68
ACTN4O43707 RNA5SP281-201ENST00000516504 135 ntBASIC4.58□□□□□ -1.68
ACTN4O43707 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.58□□□□□ -1.68
ACTN4O43707 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.58□□□□□ -1.68
ACTN4O43707 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.58□□□□□ -1.68
ACTN4O43707 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACTN4O43707 AC093732.2-201ENST00000607950 274 ntBASIC4.58□□□□□ -1.68
ACTN4O43707 Z73965.1-201ENST00000623412 2297 ntBASIC4.58□□□□□ -1.68
ACTN4O43707 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACTN4O43707 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
ACTN4O43707 AC103988.1-201ENST00000566382 2177 ntBASIC4.57□□□□□ -1.68
ACTN4O43707 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACTN4O43707 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACTN4O43707 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
ACTN4O43707 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.57□□□□□ -1.68
ACTN4O43707 SNORA51.4-201ENST00000364993 124 ntBASIC4.57□□□□□ -1.68
ACTN4O43707 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTN4O43707 RBMY2UP-201ENST00000453474 324 ntBASIC4.57□□□□□ -1.68
ACTN4O43707 AC091167.1-201ENST00000492017 396 ntBASIC4.57□□□□□ -1.68
ACTN4O43707 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.57□□□□□ -1.68
ACTN4O43707 RN7SKP43-201ENST00000516173 320 ntBASIC4.57□□□□□ -1.68
ACTN4O43707 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.57□□□□□ -1.68
ACTN4O43707 HMGN2P15-201ENST00000585707 270 ntBASIC4.57□□□□□ -1.68
ACTN4O43707 AC091152.3-201ENST00000604227 325 ntBASIC4.57□□□□□ -1.68
ACTN4O43707 RPL17P51-201ENST00000605218 238 ntBASIC4.57□□□□□ -1.68
ACTN4O43707 MIR3653-201ENST00000625572 110 ntBASIC4.57□□□□□ -1.68
ACTN4O43707 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTN4O43707 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
ACTN4O43707 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACTN4O43707 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACTN4O43707 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACTN4O43707 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.68
ACTN4O43707 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACTN4O43707 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACTN4O43707 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTN4O43707 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.56□□□□□ -1.68
ACTN4O43707 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.56□□□□□ -1.68
ACTN4O43707 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.56□□□□□ -1.68
ACTN4O43707 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTN4O43707 RNU4-13P-201ENST00000364019 141 ntBASIC4.56□□□□□ -1.68
ACTN4O43707 RNU6-1014P-201ENST00000383940 103 ntBASIC4.56□□□□□ -1.68
ACTN4O43707 RNU6-440P-201ENST00000390882 105 ntBASIC4.56□□□□□ -1.68
ACTN4O43707 HMGN2P9-201ENST00000476875 229 ntBASIC4.56□□□□□ -1.68
ACTN4O43707 RNU6-63P-201ENST00000516690 95 ntBASIC4.56□□□□□ -1.68
ACTN4O43707 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.56□□□□□ -1.68
ACTN4O43707 MIR4727-201ENST00000622232 55 ntBASIC4.56□□□□□ -1.68
ACTN4O43707 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTN4O43707 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
ACTN4O43707 AL136360.1-201ENST00000503377 1900 ntBASIC4.56□□□□□ -1.68
ACTN4O43707 AC007656.2-201ENST00000624902 4547 ntBASIC4.56□□□□□ -1.68
ACTN4O43707 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.56□□□□□ -1.68
ACTN4O43707 AC026241.1-201ENST00000517873 2142 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 RNU6-1210P-201ENST00000363775 107 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 RNU6-573P-201ENST00000383938 106 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 MIR181A2-201ENST00000384863 110 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms