Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 SNORD115-43-201ENST00000365503 82 ntBASIC7.01□□□□□ -1.29
MSH5O43196 SNORD115-36-201ENST00000365629 82 ntBASIC7.01□□□□□ -1.29
MSH5O43196 MIR493-201ENST00000385254 89 ntBASIC7.01□□□□□ -1.29
MSH5O43196 MIR4311-201ENST00000580794 100 ntBASIC7.01□□□□□ -1.29
MSH5O43196 MIR7641-1-201ENST00000627518 61 ntBASIC7.01□□□□□ -1.29
MSH5O43196 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MSH5O43196 AC239868.2-201ENST00000564237 4527 ntBASIC7.01□□□□□ -1.29
MSH5O43196 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
MSH5O43196 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
MSH5O43196 LINC01963-201ENST00000562038 3148 ntBASIC7□□□□□ -1.29
MSH5O43196 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
MSH5O43196 SNORD115-3-201ENST00000363100 82 ntBASIC7□□□□□ -1.29
MSH5O43196 SNORD115-22-201ENST00000364456 82 ntBASIC7□□□□□ -1.29
MSH5O43196 Y_RNA.379-201ENST00000365653 102 ntBASIC7□□□□□ -1.29
MSH5O43196 CD24P4-201ENST00000382840 243 ntBASIC7□□□□□ -1.29
MSH5O43196 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC7□□□□□ -1.29
MSH5O43196 AL441985.1-201ENST00000457727 251 ntBASIC7□□□□□ -1.29
MSH5O43196 snoU13.4-201ENST00000458916 104 ntBASIC7□□□□□ -1.29
MSH5O43196 UBL5P3-201ENST00000475112 231 ntBASIC7□□□□□ -1.29
MSH5O43196 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
MSH5O43196 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
MSH5O43196 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
MSH5O43196 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
MSH5O43196 OR56B2P-202ENST00000641377 2453 ntBASIC7□□□□□ -1.29
MSH5O43196 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.99□□□□□ -1.29
MSH5O43196 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
MSH5O43196 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
MSH5O43196 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
MSH5O43196 MIR192-201ENST00000384915 110 ntBASIC6.99□□□□□ -1.29
MSH5O43196 RNU11-5P-201ENST00000391216 129 ntBASIC6.99□□□□□ -1.29
MSH5O43196 TRBV25OR9-2-201ENST00000438417 374 ntBASIC6.99□□□□□ -1.29
MSH5O43196 SNORD125-201ENST00000459538 96 ntBASIC6.99□□□□□ -1.29
MSH5O43196 SNORD67.1-201ENST00000516618 108 ntBASIC6.99□□□□□ -1.29
MSH5O43196 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
MSH5O43196 AC008745.1-201ENST00000604064 271 ntBASIC6.99□□□□□ -1.29
MSH5O43196 MIR8053-201ENST00000613344 75 ntBASIC6.99□□□□□ -1.29
MSH5O43196 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC6.99□□□□□ -1.29
MSH5O43196 AC105081.1-201ENST00000617727 106 ntBASIC6.99□□□□□ -1.29
MSH5O43196 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC6.98□□□□□ -1.29
MSH5O43196 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MSH5O43196 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
MSH5O43196 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MSH5O43196 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
MSH5O43196 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MSH5O43196 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
MSH5O43196 SNORA80E-201ENST00000384744 137 ntBASIC6.98□□□□□ -1.29
MSH5O43196 RNU6-1067P-201ENST00000384752 107 ntBASIC6.98□□□□□ -1.29
MSH5O43196 AL009179.1-201ENST00000406085 265 ntBASIC6.98□□□□□ -1.29
MSH5O43196 MIR1294-201ENST00000408503 142 ntBASIC6.98□□□□□ -1.29
MSH5O43196 CST9LP2-201ENST00000437612 320 ntBASIC6.98□□□□□ -1.29
MSH5O43196 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.98□□□□□ -1.29
MSH5O43196 RN7SL385P-201ENST00000468873 276 ntBASIC6.98□□□□□ -1.29
MSH5O43196 AC134698.5-201ENST00000519444 336 ntBASIC6.98□□□□□ -1.29
MSH5O43196 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC6.98□□□□□ -1.29
MSH5O43196 FAM27D1-201ENST00000612308 341 ntBASIC6.98□□□□□ -1.29
MSH5O43196 AL049781.1-201ENST00000623195 3585 ntBASIC6.98□□□□□ -1.29
MSH5O43196 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.98□□□□□ -1.29
MSH5O43196 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
MSH5O43196 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
MSH5O43196 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
MSH5O43196 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.97□□□□□ -1.29
MSH5O43196 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
MSH5O43196 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.97□□□□□ -1.29
MSH5O43196 RNU6-1187P-201ENST00000364771 110 ntBASIC6.97□□□□□ -1.29
MSH5O43196 Y_RNA.648-201ENST00000459455 110 ntBASIC6.97□□□□□ -1.29
MSH5O43196 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
MSH5O43196 RNU4-60P-201ENST00000517239 135 ntBASIC6.97□□□□□ -1.29
MSH5O43196 RNU6-709P-201ENST00000517257 104 ntBASIC6.97□□□□□ -1.29
MSH5O43196 AC091905.4-201ENST00000623432 202 ntBASIC6.97□□□□□ -1.29
MSH5O43196 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
MSH5O43196 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
MSH5O43196 TNPO1P3-201ENST00000436471 2662 ntBASIC6.97□□□□□ -1.29
MSH5O43196 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
MSH5O43196 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
MSH5O43196 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.97□□□□□ -1.29
MSH5O43196 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.97□□□□□ -1.29
MSH5O43196 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.96□□□□□ -1.29
MSH5O43196 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
MSH5O43196 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
MSH5O43196 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
MSH5O43196 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
MSH5O43196 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
MSH5O43196 RN7SKP113-201ENST00000363891 295 ntBASIC6.96□□□□□ -1.3
MSH5O43196 SNORA62-201ENST00000365493 153 ntBASIC6.96□□□□□ -1.3
MSH5O43196 RNU6-291P-201ENST00000384720 107 ntBASIC6.96□□□□□ -1.3
MSH5O43196 SNORA26.6-201ENST00000391256 115 ntBASIC6.96□□□□□ -1.3
MSH5O43196 RN7SKP192-201ENST00000411291 327 ntBASIC6.96□□□□□ -1.3
MSH5O43196 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC6.96□□□□□ -1.3
MSH5O43196 RN7SL591P-201ENST00000496150 292 ntBASIC6.96□□□□□ -1.3
MSH5O43196 RNU7-99P-201ENST00000516271 62 ntBASIC6.96□□□□□ -1.3
MSH5O43196 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC6.96□□□□□ -1.3
MSH5O43196 AC007336.1-201ENST00000576365 3828 ntBASIC6.96□□□□□ -1.3
MSH5O43196 MIR3675-201ENST00000583661 73 ntBASIC6.96□□□□□ -1.3
MSH5O43196 MIR7853-201ENST00000584820 132 ntBASIC6.96□□□□□ -1.3
MSH5O43196 MIR4762-201ENST00000585261 75 ntBASIC6.96□□□□□ -1.3
MSH5O43196 AC104996.3-201ENST00000590718 94 ntBASIC6.96□□□□□ -1.3
MSH5O43196 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
MSH5O43196 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
MSH5O43196 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.96□□□□□ -1.3
MSH5O43196 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms