Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC017071.1-201ENST00000564407 2204 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 Y_RNA.16-201ENST00000362421 102 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 Y_RNA.60-201ENST00000362831 98 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 SNORD32B-201ENST00000364460 84 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 SNORA68.1-201ENST00000364537 132 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 RNU6-1175P-201ENST00000365200 107 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 RNU6-102P-201ENST00000384485 104 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 AL033519.2-201ENST00000403958 392 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 U6atac.2-201ENST00000408644 118 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 RN7SKP111-201ENST00000410349 271 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 RPL23AP36-201ENST00000413895 458 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 RNU2-44P-201ENST00000516795 194 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 HSPE1P18-201ENST00000517602 280 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 SNORD11B-201ENST00000607707 90 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PCDHA9Q9Y5H5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 MIR410-201ENST00000362222 80 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 RNU6-326P-201ENST00000365480 107 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 SNORA18.2-201ENST00000383865 132 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 Y_RNA.477-201ENST00000384352 108 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 SNORD17-201ENST00000390930 237 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 SNORA53-201ENST00000391141 249 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 RPS29P12-201ENST00000460178 152 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 SERF1AP1-201ENST00000514575 187 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 Y_RNA.673-201ENST00000516306 88 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 DEFB131C-201ENST00000528817 165 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 MIR5006-201ENST00000583027 110 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 AC022441.3-201ENST00000605737 136 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 AC078938.1-201ENST00000620993 318 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 MIR7515-201ENST00000637837 67 ntBASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA9Q9Y5H5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 MAPK10-362ENST00000641864 4484 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 MIR148B-201ENST00000362252 99 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 RNU6-727P-201ENST00000363592 107 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 MIR218-2-201ENST00000385006 110 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 RNU4-30P-201ENST00000410245 143 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 RNU6-1328P-201ENST00000410938 106 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 AC004866.1-201ENST00000411748 78 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 RAB28P5-201ENST00000427490 651 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 AC025518.1-201ENST00000479856 347 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 RNU1-143P-201ENST00000516296 146 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 SCARNA3-201ENST00000517097 143 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 U1.23-201ENST00000610293 146 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 RNU1-68P-201ENST00000615382 146 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 U1.39-201ENST00000621562 146 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 AC034229.5-201ENST00000624258 185 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 AL356274.2-201ENST00000624379 3752 ntBASIC3.23□□□□□ -1.89
PCDHA9Q9Y5H5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 RNU4-35P-201ENST00000362588 141 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 Y_RNA.286-201ENST00000364813 102 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 SNORA72.2-201ENST00000365028 127 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 SNORA62.3-201ENST00000365110 153 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 SNORD58.1-201ENST00000391313 66 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 PTMAP2-201ENST00000397627 327 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 GOT2P5-201ENST00000433995 546 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 AC140059.1-201ENST00000489238 361 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 RNU2-31P-201ENST00000516954 155 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 AC010620.2-201ENST00000600135 313 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 AL590240.4-201ENST00000616908 390 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 AC068205.3-201ENST00000636385 468 ntBASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PCDHA9Q9Y5H5 RNU6-1264P-201ENST00000383891 107 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms