Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RNU6-747P-201ENST00000390928 104 ntBASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 RNU6-241P-201ENST00000391148 104 ntBASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 AL583843.1-201ENST00000456070 346 ntBASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 AC092436.3-201ENST00000511788 257 ntBASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 AL157871.3-201ENST00000557231 293 ntBASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 RNU4-5P-201ENST00000607255 135 ntBASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 MIR8076-201ENST00000611401 83 ntBASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 MIR610-201ENST00000385139 96 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 RNU6-679P-201ENST00000391003 106 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 RNU6-817P-201ENST00000391083 104 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 MIR548H2-201ENST00000408874 88 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 AC027644.1-201ENST00000419595 298 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 AP003049.1-201ENST00000529418 457 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 MIR3192-201ENST00000584920 77 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 MTND3P19-201ENST00000603825 345 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 AP002360.4-201ENST00000606980 481 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 AC010975.3-201ENST00000618727 978 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 AP000943.4-201ENST00000622912 357 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 AC120349.2-201ENST00000625002 298 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 MIR6079-201ENST00000635807 62 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 MIR1295B-201ENST00000636144 60 ntBASIC-0.54□□□□□ -2.5
AP4S1Q9Y587 SNORD56.1-201ENST00000362913 68 ntBASIC-0.55□□□□□ -2.5
AP4S1Q9Y587 RNU6-199P-201ENST00000362954 107 ntBASIC-0.55□□□□□ -2.5
AP4S1Q9Y587 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.55□□□□□ -2.5
AP4S1Q9Y587 TIMM9P3-201ENST00000428659 274 ntBASIC-0.55□□□□□ -2.5
AP4S1Q9Y587 RNU7-136P-201ENST00000458819 69 ntBASIC-0.55□□□□□ -2.5
AP4S1Q9Y587 AC036111.3-201ENST00000526389 112 ntBASIC-0.55□□□□□ -2.5
AP4S1Q9Y587 AC092447.9-201ENST00000603395 144 ntBASIC-0.55□□□□□ -2.5
AP4S1Q9Y587 RPL21P136-201ENST00000605378 396 ntBASIC-0.55□□□□□ -2.5
AP4S1Q9Y587 RNY4P16-201ENST00000364768 94 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 SNORD51.1-201ENST00000365405 77 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 SNORA75.6-201ENST00000391318 127 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 PCNPP3-201ENST00000393579 471 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 RNU6-57P-201ENST00000411348 103 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 AC019070.1-201ENST00000415008 1024 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 STAG3L5P-204ENST00000443759 179 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 SNORD4A-201ENST00000459174 72 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 HMGN2P26-201ENST00000463169 339 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 AC074133.1-201ENST00000515696 183 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 AP003716.2-201ENST00000528260 108 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 MIR3612-201ENST00000579753 87 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 MIR4293-201ENST00000584305 78 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 AC234772.3-201ENST00000602277 528 ntBASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.56□□□□□ -2.5
AP4S1Q9Y587 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 RNA5SP325-201ENST00000363756 130 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 MIR643-201ENST00000385267 97 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 AC016909.1-201ENST00000415916 166 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 MTND4LP16-201ENST00000440828 295 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 LINC01399-202ENST00000458450 244 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 RNU7-14P-201ENST00000459331 62 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 SNORA43.2-201ENST00000516652 128 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 AP001189.2-201ENST00000527320 189 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 MIR1273C-201ENST00000578669 77 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 AC007014.2-201ENST00000615581 479 ntBASIC-0.57□□□□□ -2.5
AP4S1Q9Y587 SNORA9.1-201ENST00000362412 131 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 RNU6-127P-201ENST00000390897 107 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 RN7SKP200-201ENST00000410564 320 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 PDCL2P1-201ENST00000419302 352 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 AC007969.2-201ENST00000441891 191 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 MRPL42P4-201ENST00000453267 443 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 AC025465.4-201ENST00000513422 638 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 AC122134.1-202ENST00000569111 1201 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 MIR4300-201ENST00000581016 96 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 AC005176.2-201ENST00000596933 147 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 AC064872.1-201ENST00000604823 1072 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 BCRP9-201ENST00000605312 388 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 AP000484.1-201ENST00000620067 1252 ntBASIC-0.58□□□□□ -2.5
AP4S1Q9Y587 MIR1185-1-201ENST00000408598 86 ntBASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 RNU6-994P-201ENST00000410507 111 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms