Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SYNPO2Q9UMS6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.37□□□□□ -1.87
SYNPO2Q9UMS6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 U3.13-201ENST00000364804 214 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 MIR215-201ENST00000384858 110 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 MIR1302-6-201ENST00000408466 90 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 RNU2-20P-201ENST00000410425 191 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 PTGES3P4-201ENST00000426243 356 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 AC025750.2-201ENST00000442609 450 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 GPM6BP3-201ENST00000442797 145 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 RPL39P29-201ENST00000447779 157 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 UQCRHP3-201ENST00000451503 251 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 AP000870.1-201ENST00000472927 406 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 RNA5SP356-201ENST00000515972 94 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 RPPH1-2P-201ENST00000516688 293 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 SNORA31.21-201ENST00000517180 77 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 CKS1BP7-201ENST00000522230 235 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 AC023157.2-201ENST00000540596 141 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 GTF3AP2-201ENST00000557014 266 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 AC090617.3-201ENST00000573670 475 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 MIR3162-201ENST00000581818 82 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 AC008739.2-201ENST00000597006 317 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 AC091152.3-201ENST00000604227 325 ntBASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SYNPO2Q9UMS6 AC010615.1-201ENST00000594254 1764 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 Y_RNA.447-201ENST00000384184 113 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 RNU6-622P-201ENST00000384272 103 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 RNU6-611P-201ENST00000384276 104 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 Y_RNA.476-201ENST00000384347 108 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 RNU6-19P-201ENST00000384718 107 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 MIR9-1-201ENST00000385198 89 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 RNU6-388P-201ENST00000517012 105 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 RNU6-389P-201ENST00000517048 105 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 AP003733.2-201ENST00000529409 171 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 AC023824.2-201ENST00000566185 400 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 AC243829.7-201ENST00000633081 225 ntBASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNPO2Q9UMS6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 GABRG2-229ENST00000641017 3628 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 RNU6-1301P-201ENST00000362724 104 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 Y_RNA.183-201ENST00000363882 113 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 Y_RNA.288-201ENST00000364854 92 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 RNU6-926P-201ENST00000384075 107 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 U8.10-201ENST00000384260 133 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 RNU6-318P-201ENST00000384283 103 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 RNU6-748P-201ENST00000384648 107 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 RNA5SP390-201ENST00000410191 113 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 RNU2-38P-201ENST00000410856 79 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 HMGN2P35-201ENST00000412164 270 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AC096649.2-201ENST00000416186 393 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 WARS2P1-201ENST00000429678 537 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AC004383.1-201ENST00000438135 289 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AP000705.1-201ENST00000454567 350 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 SNORD127-201ENST00000458892 86 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AC107626.1-201ENST00000471084 183 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 MTND1P19-201ENST00000511780 315 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AC067942.3-201ENST00000512025 362 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 UBL5P4-201ENST00000562584 236 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AC136932.1-201ENST00000574771 208 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AC090897.2-201ENST00000581715 130 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AL078605.1-201ENST00000603529 500 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AL359198.2-201ENST00000611836 194 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 RMST_6.1-201ENST00000611980 203 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AC110079.1-202ENST00000635213 138 ntBASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SYNPO2Q9UMS6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SYNPO2Q9UMS6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
SYNPO2Q9UMS6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.34□□□□□ -1.88
SYNPO2Q9UMS6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.34□□□□□ -1.88
SYNPO2Q9UMS6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 Y_RNA.143-201ENST00000363520 106 ntBASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 SNORA5B-201ENST00000363786 132 ntBASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 RNU6-1141P-201ENST00000364520 107 ntBASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 RNU6-142P-201ENST00000384019 107 ntBASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 RNY3P4-201ENST00000384428 101 ntBASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 MIR549A-201ENST00000385268 96 ntBASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 RNA5SP213-201ENST00000391031 106 ntBASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 AC016700.2-201ENST00000446011 156 ntBASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 RNU6-1132P-201ENST00000459214 107 ntBASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SYNPO2Q9UMS6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms