Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC022364.2-201ENST00000457963 554 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AC112206.4-201ENST00000515142 405 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AP002453.2-201ENST00000533503 320 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AC068587.4-201ENST00000533893 186 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AC090049.2-201ENST00000550377 109 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AC009712.1-201ENST00000564938 316 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 MIR5697-201ENST00000578045 78 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 MTND1P15-201ENST00000579262 949 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AC092354.1-201ENST00000606057 376 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AC009994.1-201ENST00000606889 253 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AC091965.4-201ENST00000607691 587 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AC108747.1-201ENST00000609508 535 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 SNORA12.1-201ENST00000390873 148 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 RN7SKP200-201ENST00000410564 320 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 EEF1A1P40-201ENST00000412883 573 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 AC010975.2-201ENST00000427781 588 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 USP9YP28-201ENST00000435142 589 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 AL117351.1-201ENST00000438864 766 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 AL606517.2-201ENST00000442855 241 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 SNRPGP9-201ENST00000456025 225 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 RPS23P5-201ENST00000495419 428 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 TMF1P1-201ENST00000576058 373 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 MIR544B-201ENST00000582372 78 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 AL356157.2-201ENST00000605122 111 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 AC024060.1-201ENST00000607052 494 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 AC012409.4-201ENST00000612923 249 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 AC005520.5-201ENST00000613926 164 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 AC106754.2-201ENST00000623006 233 ntBASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
COMMD3Q9UBI1 AL445523.1-201ENST00000451184 1362 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 MTND5P16-201ENST00000460269 1703 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 RNY4P24-201ENST00000362735 96 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 RNU6-371P-201ENST00000364283 108 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 RNY1P8-201ENST00000383970 114 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 RNU6-418P-201ENST00000384035 107 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 MIR660-201ENST00000385235 97 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 MIR300-201ENST00000401138 83 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 AC244098.3-201ENST00000424803 96 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 AC010154.1-201ENST00000425857 269 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 AL133217.1-201ENST00000450980 425 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 RPL39P39-201ENST00000455840 151 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 AC245047.8-201ENST00000456455 284 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 RNU6-1146P-201ENST00000516282 102 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 LRRC6P1-201ENST00000532188 885 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 MTND3P13-201ENST00000574391 343 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 RNU6-88P-201ENST00000606801 100 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 AC072039.2-201ENST00000608883 439 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 AC131235.4-201ENST00000609288 620 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 AL138726.1-201ENST00000614873 333 ntBASIC0.07□□□□□ -2.4
COMMD3Q9UBI1 U3.4-201ENST00000363352 213 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 SNORD32A-201ENST00000364805 84 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 RNU4-48P-201ENST00000365559 182 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 RNU6-378P-201ENST00000384324 107 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 RNU6-298P-201ENST00000390888 96 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 HSFY7P-201ENST00000432672 318 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 HSFY8P-201ENST00000437934 318 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 HMGB1P29-201ENST00000505659 499 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 AK3P2-201ENST00000507976 429 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 MTCO3P27-201ENST00000514397 196 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 ADI1P3-201ENST00000549509 470 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 AP002360.4-201ENST00000606980 481 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 AL031775.1-201ENST00000607014 887 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 MIR6734-201ENST00000621166 68 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 AL603839.4-201ENST00000624658 1005 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 AC100810.6-201ENST00000638068 285 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.06□□□□□ -2.4
COMMD3Q9UBI1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-37P-201ENST00000362692 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-11P-201ENST00000364234 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-1-201ENST00000383898 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 SNORA36.2-201ENST00000384004 127 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-42P-201ENST00000384165 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-36P-201ENST00000384172 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-4P-201ENST00000384205 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-5P-201ENST00000384238 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-3P-201ENST00000384314 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-2-201ENST00000384627 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-9-201ENST00000384776 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-33P-201ENST00000384793 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AL451046.2-201ENST00000403074 277 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 MIR1283-1-201ENST00000408494 87 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms