Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RPL30P4-201ENST00000429309 333 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 MICF-203ENST00000432679 129 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 RPEP5-201ENST00000441137 268 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 DYNLT3P2-201ENST00000442517 295 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 FCF1P4-201ENST00000448326 183 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 AC103975.1-201ENST00000482506 483 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 CKS1BP2-201ENST00000497342 240 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 RNU6-897P-201ENST00000517135 105 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 RAC1P9-201ENST00000604990 392 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 AC069294.1-201ENST00000608397 350 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 AC240442.1-201ENST00000616055 283 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 AC091953.5-201ENST00000622919 233 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 RNA5SP361-201ENST00000362686 118 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 Y_RNA.179-201ENST00000363844 90 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 RNU6-770P-201ENST00000363929 105 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 RNU6-318P-201ENST00000384283 103 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 RNA5SP213-201ENST00000391031 106 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 U6atac.2-201ENST00000408644 118 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 RNU6-1001P-201ENST00000411265 100 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 AC027124.2-201ENST00000428249 105 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 RPL23AP58-201ENST00000440453 469 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 AC010095.1-201ENST00000443543 144 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 RN7SKP49-201ENST00000516675 260 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 AC026470.2-201ENST00000561492 181 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 AC125232.2-201ENST00000592457 143 ntBASIC3.48□□□□□ -1.85
CCDC113Q9H0I3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 Y_RNA.214-201ENST00000364201 112 ntBASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 SET-203ENST00000372688 801 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 RNU6-611P-201ENST00000384276 104 ntBASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 MIR568-201ENST00000385036 95 ntBASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 RNA5SP293-201ENST00000410527 113 ntBASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 RNU6-1012P-201ENST00000516606 109 ntBASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 AC068657.1-201ENST00000520807 306 ntBASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 AL161670.1-201ENST00000554348 137 ntBASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 AC073476.4-201ENST00000628409 72 ntBASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 FAM35CP-201ENST00000554755 2470 ntBASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC113Q9H0I3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 MIR148B-201ENST00000362252 99 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 Y_RNA.19-201ENST00000362462 99 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 Y_RNA.183-201ENST00000363882 113 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 Y_RNA.276-201ENST00000364732 109 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 RNU6-26P-201ENST00000383985 107 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 SNORA18.3-201ENST00000384122 132 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 SNORA54-201ENST00000384281 123 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 ELOCP20-201ENST00000422460 345 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AL731563.1-201ENST00000442202 214 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AC023141.11-201ENST00000508864 202 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AC067942.3-201ENST00000512025 362 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AC105245.1-201ENST00000581934 244 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 UBL5P2-201ENST00000583788 219 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AC011476.5-201ENST00000615594 130 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AC005562.2-201ENST00000618264 111 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 U4.1-201ENST00000620349 87 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AC130454.1-201ENST00000622948 401 ntBASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC113Q9H0I3 AC080128.1-201ENST00000474389 1917 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 RNU6-793P-201ENST00000384233 104 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 RNU6-574P-201ENST00000384265 107 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 MIR329-1-201ENST00000385028 80 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 SNORA12-201ENST00000391162 147 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 RPL21P1-201ENST00000399532 476 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 Y_RNA.597-201ENST00000410463 100 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 PCNPP5-201ENST00000452246 481 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 RNU1-143P-201ENST00000516296 146 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 Y_RNA.683-201ENST00000516508 93 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 SNORA31.26-201ENST00000517250 137 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 RNU6-586P-201ENST00000517265 104 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms