Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 Y_RNA.64-201ENST00000362845 102 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 SNORD56.3-201ENST00000363507 71 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 RNU6-727P-201ENST00000363592 107 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 Y_RNA.222-201ENST00000364264 102 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 RNU6-121P-201ENST00000410525 99 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 IPO7P1-201ENST00000442031 636 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 IFNA11P-201ENST00000446352 526 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 LINC01399-202ENST00000458450 244 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 AC025465.3-201ENST00000510570 311 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 MIR5006-201ENST00000583027 110 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 U4.1-201ENST00000620349 87 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 MIR8062-201ENST00000621515 85 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 AC138915.1-201ENST00000565427 1685 ntBASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TRIM55Q9BYV6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 SNORD9-201ENST00000362566 104 ntBASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 Y_RNA.143-201ENST00000363520 106 ntBASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 RNA5SP267-201ENST00000364893 126 ntBASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 FO393413.1-201ENST00000402892 195 ntBASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 PCNPP5-201ENST00000452246 481 ntBASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 RRN3P3-201ENST00000549207 578 ntBASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 AC136932.1-201ENST00000574771 208 ntBASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 MIR3671-201ENST00000580455 88 ntBASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM55Q9BYV6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 RNU6-220P-201ENST00000390919 107 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 Z92545.1-201ENST00000411782 234 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 ARL5AP4-201ENST00000430731 512 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 AC009237.7-201ENST00000447357 229 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 AC083906.5-201ENST00000503722 328 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 RNU6-344P-201ENST00000516635 111 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 RNU2-44P-201ENST00000516795 194 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 CYCSP23-201ENST00000519781 313 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 MIR376A1-201ENST00000616574 68 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 MIR5739-201ENST00000619803 80 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 MIR3651-201ENST00000630427 90 ntBASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM55Q9BYV6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 MFSD8-233ENST00000641482 4860 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 AC017071.1-201ENST00000564407 2204 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 RNA5SP50-201ENST00000363731 107 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 Y_RNA.193-201ENST00000363979 102 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 UQCRBP2-201ENST00000447827 297 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 SNORD105B-201ENST00000458770 79 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 AC008155.2-201ENST00000464337 397 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 RNU6-408P-201ENST00000515910 100 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 AP003733.2-201ENST00000529409 171 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 AC004817.2-201ENST00000561794 651 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 MIR4300-201ENST00000581016 96 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 RPL17P51-201ENST00000605218 238 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 AC107871.2-201ENST00000612894 502 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 AC073476.4-201ENST00000628409 72 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 Z83843.1-201ENST00000604070 3685 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 LINC02555-201ENST00000563933 1951 ntBASIC3.42□□□□□ -1.86
TRIM55Q9BYV6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 MIR148B-201ENST00000362252 99 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 RNU6-961P-201ENST00000363893 105 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 RNU6-937P-201ENST00000384325 106 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 SNORD115-46-201ENST00000390982 71 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AL033519.2-201ENST00000403958 392 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 MIR1294-201ENST00000408503 142 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 RNU2-20P-201ENST00000410425 191 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 RPL21P38-201ENST00000418090 167 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 CYCSP4-201ENST00000429682 331 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 CBX3P6-201ENST00000430257 527 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AC005002.2-201ENST00000438228 269 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms