Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-3Q9BYR6 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-3Q9BYR6 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 RNU6-260P-201ENST00000384092 107 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR1302-7-201ENST00000408841 72 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 HMGN2P7-201ENST00000456186 273 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 RN7SL492P-201ENST00000460700 295 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 AC104619.4-201ENST00000510773 249 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR4685-201ENST00000578185 69 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR3189-201ENST00000578735 73 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR5094-201ENST00000578766 85 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 PRELID3BP2-201ENST00000605362 201 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR6739-201ENST00000622461 75 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 UBA3-213ENST00000631029 123 ntTSL 5 BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 U6.103-201ENST00000637085 61 ntBASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-3Q9BYR6 AL137141.1-201ENST00000624622 4836 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 VTRNA3-1P-201ENST00000362552 102 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 SNORA2.1-201ENST00000363089 137 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 RNU6-698P-201ENST00000363523 107 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 RNA5SP48-201ENST00000363969 126 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 RNU6-34P-201ENST00000364874 107 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 RNA5SP152-201ENST00000365184 110 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR585-201ENST00000384887 94 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR599-201ENST00000385069 95 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 AL122020.1-201ENST00000472287 459 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 RN7SL466P-201ENST00000497546 295 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 AC008945.1-201ENST00000505144 499 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 RNU7-41P-201ENST00000515917 61 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 RN7SL689P-201ENST00000577215 297 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 MRPL57P3-201ENST00000619218 176 ntBASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP3-3Q9BYR6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 AL021877.2-201ENST00000624442 10684 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 RNA5SP477-201ENST00000362639 119 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 RNA5SP478-201ENST00000364657 115 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 GNG5P2-201ENST00000372054 207 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR216B-201ENST00000390186 82 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 GNG5P5-201ENST00000420444 220 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 AC025033.1-201ENST00000463883 194 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 RN7SL456P-201ENST00000469290 295 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 AC022206.1-201ENST00000495947 347 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 AC023141.11-201ENST00000508864 202 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR378C-201ENST00000578683 81 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 AC011193.2-201ENST00000582638 367 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 AC013244.2-201ENST00000603396 103 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 SNORD96A-201ENST00000606577 79 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR6762-201ENST00000613340 86 ntBASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms