Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-9Q9BYQ8 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
KRTAP4-9Q9BYQ8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-9Q9BYQ8 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-9Q9BYQ8 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-9Q9BYQ8 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 AC110716.2-201ENST00000563865 3945 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 JPX-212ENST00000639185 9658 ntTSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 SNORA25.8-201ENST00000364831 128 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 RNU6-53P-201ENST00000365367 106 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 RNU6-997P-201ENST00000384725 107 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 MIR183-201ENST00000384958 110 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 U8.16-201ENST00000391279 133 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 SRIP3-201ENST00000413200 219 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 AC093162.1-201ENST00000419682 124 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 AC123900.1-201ENST00000420390 96 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 DEFA11P-201ENST00000446470 261 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 snoU13.20-201ENST00000459180 104 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 snoU13.2-201ENST00000459201 104 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 RPL10P18-201ENST00000519384 309 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 MIR4776-2-201ENST00000580204 80 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 MIR548H5-201ENST00000580314 60 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 SNORA4-201ENST00000584302 138 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 MIR6507-201ENST00000613630 70 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 U1.25-201ENST00000614085 162 ntBASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-9Q9BYQ8 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 AC004817.4-201ENST00000602396 3625 ntBASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 AL355834.1-201ENST00000556602 3965 ntBASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 RNU6-1017P-201ENST00000363613 106 ntBASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 MIR515-2-201ENST00000384883 83 ntBASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 MIR515-1-201ENST00000384884 83 ntBASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 HMGN2P8-201ENST00000391458 268 ntBASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 BMS1P17-202ENST00000416720 316 ntBASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 AC004975.1-201ENST00000428733 208 ntBASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-9Q9BYQ8 AL031183.1-201ENST00000457667 207 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms