Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AL138963.2-201ENST00000605137 226 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AC010205.1-201ENST00000616668 449 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 MIR8057-201ENST00000620957 69 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 U6.92-201ENST00000636464 89 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AC099654.7-201ENST00000635788 2127 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 AC138915.1-201ENST00000565427 1685 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 RNU6-238P-201ENST00000363313 106 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 RNU1-57P-201ENST00000384491 166 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 MIR487A-201ENST00000385009 80 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 MIR10B-201ENST00000385011 110 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 RNA5SP492-201ENST00000411330 114 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 RPL19P1-201ENST00000411635 428 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 AL731563.1-201ENST00000442202 214 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 AC096638.1-201ENST00000444678 216 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 AC112771.1-201ENST00000463581 102 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 AC007215.1-201ENST00000464893 276 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 RPS29P2-201ENST00000479278 136 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 RPL36AP48-201ENST00000485521 314 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 RNU6-1012P-201ENST00000516606 109 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 RNU6-897P-201ENST00000517135 105 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 AC022868.1-201ENST00000517767 391 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 MYL12BP1-201ENST00000569826 507 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 AL034555.1-201ENST00000604816 211 ntBASIC3.09□□□□□ -1.91
CCHCR1Q8TD31 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CCHCR1Q8TD31 RNA5SP374-201ENST00000362939 125 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.556-201ENST00000384677 113 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 RNU6-541P-201ENST00000384709 110 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 MIR186-201ENST00000384988 86 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 SNORD67-201ENST00000390833 111 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 UBA52P6-201ENST00000399822 382 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 AL512633.1-201ENST00000399931 655 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 FO393413.1-201ENST00000402892 195 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 RNA5SP201-201ENST00000410316 124 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 RNU6-130P-201ENST00000411112 103 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 RPS15AP7-201ENST00000439294 405 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 DYNLT3P2-201ENST00000442517 295 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 RNA5SP54-201ENST00000516951 92 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 AC107016.2-201ENST00000547968 190 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 AC073410.2-201ENST00000603240 332 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 AL359854.1-201ENST00000614203 1594 ntBASIC3.08□□□□□ -1.92
CCHCR1Q8TD31 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 MIR22-201ENST00000362190 85 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 RNU6-1210P-201ENST00000363775 107 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.183-201ENST00000363882 113 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 SNORA71.1-201ENST00000364523 117 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 RNU4-56P-201ENST00000364700 142 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 RNU6-281P-201ENST00000384212 103 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 RNU6-318P-201ENST00000384283 103 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.512-201ENST00000384518 102 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 SNORA11.1-201ENST00000408133 129 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 WARS2P1-201ENST00000429678 537 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 AL121594.1-201ENST00000475906 575 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 RPL23AP70-201ENST00000483361 460 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 RNU6-1143P-201ENST00000516125 104 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 MIR3671-201ENST00000580455 88 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 AC011471.1-201ENST00000585766 187 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 AC125232.2-201ENST00000592457 143 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 UCA1.1-201ENST00000620952 75 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 AC007318.2-201ENST00000620999 243 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 MIR8062-201ENST00000621515 85 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 AC009487.2-201ENST00000420969 6821 ntBASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCHCR1Q8TD31 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 MIR422A-201ENST00000362286 90 ntBASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 RNU6-770P-201ENST00000363929 105 ntBASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 RNU6-702P-201ENST00000364982 107 ntBASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.401-201ENST00000383965 117 ntBASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 MIR491-201ENST00000384877 84 ntBASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 CBX3P9-201ENST00000402326 552 ntBASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 RPL27AP5-201ENST00000469428 449 ntBASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 SCARNA11.3-201ENST00000517276 130 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms