Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 AC027290.2-201ENST00000623210 18662 ntBASIC4.82□□□□□ -1.64
NKX2-3Q8TAU0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 Y_RNA.549-201ENST00000384657 102 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 NDUFB4P4-201ENST00000404822 243 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 MIR1263-201ENST00000408324 86 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 MIR1179-201ENST00000408703 91 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 HSPE1P12-201ENST00000412576 301 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 AC005300.1-201ENST00000428401 373 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 MTATP6P21-201ENST00000440681 189 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 RPL39P34-201ENST00000477141 156 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 SNORA31.8-201ENST00000516327 108 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 AC026403.1-201ENST00000518938 295 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 MTND6P33-201ENST00000571794 183 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 MIR6868-201ENST00000611215 58 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 AC009093.8-201ENST00000641769 292 ntBASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NKX2-3Q8TAU0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 RNA5SP124-201ENST00000362739 110 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 RNU6-778P-201ENST00000363269 103 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 RNU6-674P-201ENST00000363831 107 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 RNA5SP72-201ENST00000364442 117 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 RNU6-140P-201ENST00000384566 108 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 PTMAP5-201ENST00000393073 333 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 SNORA57.3-201ENST00000411095 141 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 TOMM22P1-201ENST00000418578 312 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 AC021205.2-201ENST00000480069 347 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 PPBPP1-201ENST00000510807 373 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 AL162713.1-201ENST00000604480 262 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 AL021707.8-201ENST00000609428 183 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 MIR6500-201ENST00000622700 86 ntBASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-3Q8TAU0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 RNU6-228P-201ENST00000362700 106 ntBASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 SNORD87-201ENST00000364849 89 ntBASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 RNU6-1323P-201ENST00000384025 107 ntBASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 MTATP8P2-201ENST00000435212 202 ntBASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 RPS29P2-201ENST00000479278 136 ntBASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 RNU6-521P-201ENST00000516663 105 ntBASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-3Q8TAU0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 RNU6-487P-201ENST00000365430 104 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 MIR513A2-201ENST00000385249 127 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 MIR891A-201ENST00000401237 79 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 RNA5SP504-201ENST00000410676 117 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 AL135786.1-201ENST00000415892 214 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 RPL23AP46-201ENST00000438548 490 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 YPEL5P3-201ENST00000547227 352 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 AC027176.1-201ENST00000560204 514 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 AC025281.1-201ENST00000567026 265 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 CYP4A43P-201ENST00000568156 121 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 AC009163.5-201ENST00000575421 637 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 MIR3923-201ENST00000579521 83 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 AC097639.2-201ENST00000603159 172 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 SNORD115-40-201ENST00000606510 82 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 AL138880.2-201ENST00000616214 239 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 MIR3202-2-201ENST00000635980 79 ntBASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 AC010733.2-201ENST00000589496 5702 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms