Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC116Q8IYX3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 MFSD8-242ENST00000641690 4199 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 Y_RNA.52-201ENST00000362760 96 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 RNU6-640P-201ENST00000363693 105 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 Y_RNA.281-201ENST00000364774 94 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 Y_RNA.348-201ENST00000365403 103 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 RNU1-57P-201ENST00000384491 166 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 CRYBB2P1-203ENST00000415709 538 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 AC245291.1-201ENST00000419501 328 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 YME1L1P1-201ENST00000429435 297 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 AL353705.1-201ENST00000433468 480 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 AC083906.5-201ENST00000503722 328 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 SNORD77.4-201ENST00000516158 81 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 AC018630.3-201ENST00000542637 96 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 AL020997.2-201ENST00000602607 184 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 MIR378J-201ENST00000611988 109 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC116Q8IYX3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 SNORA31-201ENST00000362607 130 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 RNU6-1107P-201ENST00000364817 104 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 SNORA26.2-201ENST00000390922 122 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 RNA5SP332-201ENST00000391063 115 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 RNY4P29-201ENST00000410801 97 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 AC017083.1-201ENST00000428093 483 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 AC091390.1-201ENST00000433904 331 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 SNORD65B-201ENST00000459126 73 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 RN7SL738P-201ENST00000470264 297 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 RNU6-1098P-201ENST00000516772 96 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 AC100770.1-201ENST00000532310 322 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 uc_338.4-201ENST00000616635 176 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 AP001486.2-201ENST00000561652 5113 ntBASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC116Q8IYX3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 SNORD14D-201ENST00000384390 87 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 SNORD72-201ENST00000390994 80 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 MIR1911-201ENST00000410783 80 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 RNU7-57P-201ENST00000459540 60 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 AC112771.1-201ENST00000463581 102 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 RPL35AP15-201ENST00000468042 339 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 RN7SL481P-201ENST00000477764 299 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 AC010598.1-201ENST00000510378 103 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 RNA5SP20-201ENST00000515976 84 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 SNORA18.4-201ENST00000516440 124 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 RNU5F-4P-201ENST00000516581 114 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 AC027419.1-201ENST00000522976 328 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 IGKV1-22-201ENST00000524313 326 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 AC105245.1-201ENST00000581934 244 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 AC079587.1-201ENST00000603846 277 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 HSPE1P7-201ENST00000604681 321 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 RNU1-30P-201ENST00000606575 163 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 AC010889.1-201ENST00000566193 2666 ntBASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
CCDC116Q8IYX3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 RNU6-766P-201ENST00000362478 107 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 RNU4-13P-201ENST00000364019 141 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 Y_RNA.388-201ENST00000383919 113 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 MIR192-201ENST00000384915 110 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 MIR129-1-201ENST00000384972 72 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 MIR1263-201ENST00000408324 86 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 AL356387.2-201ENST00000422272 243 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 AC080013.2-201ENST00000460866 323 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 SNRPGP3-201ENST00000469405 227 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 RN7SL812P-201ENST00000493791 279 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 AC091979.2-201ENST00000607514 214 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 AC103988.1-201ENST00000566382 2177 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms