Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4DQ86TL0 RNA5SP124-201ENST00000362739 110 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 RNA5SP322-201ENST00000363617 119 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 RNU6-884P-201ENST00000363889 107 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 RNU6-335P-201ENST00000364563 113 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.456-201ENST00000384232 111 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 MIR23B-201ENST00000384832 97 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 MIR554-201ENST00000384874 96 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 MIR320B2-201ENST00000408479 138 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 AC004866.1-201ENST00000411748 78 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.48□□□□□ -1.85
ATG4DQ86TL0 RPL37P4-201ENST00000448908 268 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 RPS29P24-201ENST00000486345 171 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 SNORA67.7-201ENST00000516664 135 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 RNA5SP143-201ENST00000516936 115 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 CKS1BP7-201ENST00000522230 235 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 AC074050.1-201ENST00000563247 211 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 CYP4A27P-201ENST00000567218 190 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 SNRPGP15-201ENST00000600149 222 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 SNRPGP20-201ENST00000604477 205 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 uc_338.28-201ENST00000612082 187 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 AC006133.1-201ENST00000617106 264 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.48□□□□□ -1.85
ATG4DQ86TL0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.48□□□□□ -1.85
ATG4DQ86TL0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4DQ86TL0 ADAM3A-203ENST00000461344 2157 ntBASIC3.48□□□□□ -1.85
ATG4DQ86TL0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4DQ86TL0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4DQ86TL0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.114-201ENST00000363265 113 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.243-201ENST00000364481 109 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.280-201ENST00000364765 112 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 MLLT10P1-201ENST00000418346 262 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 AL031737.1-201ENST00000450125 223 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 AC012308.1-201ENST00000451232 178 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 RAC1P2-201ENST00000511164 579 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.692-201ENST00000516627 105 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 RNU1-117P-201ENST00000517041 158 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 AC009163.5-201ENST00000575421 637 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 MIR5685-201ENST00000579080 79 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 MIR5688-201ENST00000580619 83 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 AL451007.1-201ENST00000595491 289 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 MIR92B-201ENST00000607575 96 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 AL121890.5-201ENST00000620848 304 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 SNORD98-201ENST00000636377 67 ntBASIC3.47□□□□□ -1.85
ATG4DQ86TL0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4DQ86TL0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.85
ATG4DQ86TL0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.46□□□□□ -1.85
ATG4DQ86TL0 AC022336.2-201ENST00000568966 2538 ntBASIC3.46□□□□□ -1.85
ATG4DQ86TL0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.46□□□□□ -1.85
ATG4DQ86TL0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4DQ86TL0 SNORD45.3-201ENST00000363836 72 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 RNU6-217P-201ENST00000384164 104 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 MIR548A1-201ENST00000385041 97 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 SNORA48.5-201ENST00000391143 135 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 RN7SKP177-201ENST00000410567 355 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 RNU4-43P-201ENST00000410628 137 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 SNORA71B-202ENST00000439232 272 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 RN7SL93P-201ENST00000463035 293 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 RPL21P129-201ENST00000491732 478 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.46□□□□□ -1.86
ATG4DQ86TL0 RNA5SP208-201ENST00000516156 78 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4DQ86TL0 MIR3158-1-201ENST00000583596 81 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 AC012468.1-201ENST00000604888 430 ntBASIC3.46□□□□□ -1.86
ATG4DQ86TL0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4DQ86TL0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4DQ86TL0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
ATG4DQ86TL0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ATG4DQ86TL0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.46□□□□□ -1.86
ATG4DQ86TL0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4DQ86TL0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 Y_RNA.116-201ENST00000363292 103 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 SNORD58C-201ENST00000365223 64 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 RNU6-597P-201ENST00000365620 102 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 SNORA20B-201ENST00000384220 132 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 MIR30B-201ENST00000384850 88 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 EI24P2-201ENST00000397776 1076 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 CBX3P9-201ENST00000402326 552 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 GOT2P5-201ENST00000433995 546 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 AC117454.1-201ENST00000491120 168 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 RNA5SP164-201ENST00000516533 110 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 AC090897.2-201ENST00000581715 130 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms