Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RNA5SP305-201ENST00000362665 119 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RNA5SP375-201ENST00000362975 119 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RNU1-49P-201ENST00000363468 159 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RNU6-54P-201ENST00000365563 107 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RNA5SP187-201ENST00000384400 119 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 MT-TF-201ENST00000387314 71 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 FO393413.1-201ENST00000402892 195 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 SNORD100-201ENST00000408573 76 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 AC017083.1-201ENST00000428093 483 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 AC097635.1-201ENST00000450678 155 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RN7SL385P-201ENST00000468873 276 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RN7SL481P-201ENST00000477764 299 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RPS21P4-201ENST00000487122 248 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 TRBV12-2-201ENST00000489763 344 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 AC008953.1-201ENST00000497334 318 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RNU6-1265P-201ENST00000516342 103 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 Vault.1-201ENST00000516474 102 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RNU6-656P-201ENST00000516785 107 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 AP004607.2-201ENST00000533949 322 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 MIR4330-201ENST00000579077 105 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 MIR3935-201ENST00000583472 104 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 MIR548V-201ENST00000584165 80 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 MIR378J-201ENST00000611988 109 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RN7SL544P-201ENST00000617232 284 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 MIR7159-201ENST00000620587 66 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 RN7SL763P-201ENST00000620922 284 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 MIR8080-201ENST00000622224 89 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 MFSD8-218ENST00000641186 4448 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 AC010300.1-201ENST00000600671 5134 ntBASIC1.96□□□□□ -2.1
LCE4AQ5TA78 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 TEK-204ENST00000519097 3836 ntTSL 2 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 ZNF300-205ENST00000446148 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
LCE4AQ5TA78 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 RNU6-495P-201ENST00000362995 107 ntBASIC1.95□□□□□ -2.1
LCE4AQ5TA78 RNU6-698P-201ENST00000363523 107 ntBASIC1.95□□□□□ -2.1
LCE4AQ5TA78 U8.4-201ENST00000363626 134 ntBASIC1.95□□□□□ -2.1
LCE4AQ5TA78 RNU6-34P-201ENST00000364874 107 ntBASIC1.95□□□□□ -2.1
LCE4AQ5TA78 MIR592-201ENST00000384959 97 ntBASIC1.95□□□□□ -2.1
LCE4AQ5TA78 MIR216B-201ENST00000390186 82 ntBASIC1.95□□□□□ -2.1
LCE4AQ5TA78 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC1.95□□□□□ -2.1
LCE4AQ5TA78 HSPE1P9-201ENST00000440046 311 ntBASIC1.95□□□□□ -2.1
LCE4AQ5TA78 RN7SL561P-201ENST00000488553 281 ntBASIC1.95□□□□□ -2.1
LCE4AQ5TA78 AC022206.1-201ENST00000495947 347 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms