Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXA2O43364 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXA2O43364 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXA2O43364 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXA2O43364 AC007256.1-201ENST00000392253 2765 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 AF117829.1-206ENST00000621883 3802 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXA2O43364 AP001486.2-201ENST00000561652 5113 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 RNA5SP295-201ENST00000362655 121 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 RNU6-978P-201ENST00000364371 103 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 SNORA51.4-201ENST00000364993 124 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 AL355796.1-201ENST00000406706 323 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXA2O43364 RNU7-23P-201ENST00000459465 62 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 RNA5SP103-201ENST00000459503 118 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 AC112771.1-201ENST00000463581 102 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 RPS26P55-201ENST00000471178 356 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 SNORA70.14-201ENST00000516205 110 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 RNU5F-4P-201ENST00000516581 114 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 IFITM8P-201ENST00000522529 394 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA2O43364 AL160236.1-201ENST00000556317 195 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA2O43364 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA2O43364 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA2O43364 SCN1A-220ENST00000641603 12506 ntBASIC4.54□□□□□ -1.68
HOXA2O43364 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXA2O43364 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA2O43364 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
HOXA2O43364 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HOXA2O43364 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA2O43364 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA2O43364 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA2O43364 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXA2O43364 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA2O43364 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
HOXA2O43364 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA2O43364 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA2O43364 SNORA27.1-201ENST00000362604 124 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 Y_RNA.114-201ENST00000363265 113 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 RNU6-674P-201ENST00000363831 107 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 SNORA62.3-201ENST00000365110 153 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 SNORD18B-201ENST00000365659 72 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 AL135786.1-201ENST00000415892 214 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 MLLT10P1-201ENST00000418346 262 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA2O43364 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA2O43364 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
HOXA2O43364 RNU6-1299P-201ENST00000516316 100 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 AC023632.4-201ENST00000517783 191 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 AC131055.1-201ENST00000584626 316 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
HOXA2O43364 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA2O43364 OTUD4P1-201ENST00000237841 3067 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXA2O43364 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA2O43364 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA2O43364 AL161912.2-201ENST00000565707 3007 ntBASIC4.53□□□□□ -1.68
HOXA2O43364 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA2O43364 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA2O43364 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXA2O43364 Z82209.1-201ENST00000422141 2135 ntBASIC4.52□□□□□ -1.69
HOXA2O43364 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA2O43364 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA2O43364 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HOXA2O43364 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA2O43364 RNU6-136P-201ENST00000384663 107 ntBASIC4.52□□□□□ -1.69
HOXA2O43364 MIR1183-201ENST00000408856 89 ntBASIC4.52□□□□□ -1.69
HOXA2O43364 AC090515.1-201ENST00000465295 476 ntBASIC4.52□□□□□ -1.69
HOXA2O43364 Y_RNA.694-201ENST00000516677 117 ntBASIC4.52□□□□□ -1.69
HOXA2O43364 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA2O43364 AC022655.2-201ENST00000577280 318 ntBASIC4.52□□□□□ -1.69
HOXA2O43364 AL606490.9-201ENST00000603331 271 ntBASIC4.52□□□□□ -1.69
HOXA2O43364 AC002076.2-201ENST00000617362 122 ntBASIC4.52□□□□□ -1.69
HOXA2O43364 AL121890.5-201ENST00000620848 304 ntBASIC4.52□□□□□ -1.69
HOXA2O43364 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
HOXA2O43364 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA2O43364 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA2O43364 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA2O43364 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA2O43364 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA2O43364 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA2O43364 AC006504.1-201ENST00000562493 3666 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA2O43364 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA2O43364 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXA2O43364 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA2O43364 AL353746.1-201ENST00000566293 6881 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXA2O43364 SNORA60-201ENST00000362396 134 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 RNA5SP22-201ENST00000365393 109 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 RNU6-484P-201ENST00000384016 107 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 RNU6-198P-201ENST00000384258 104 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 RNU6-750P-201ENST00000390946 107 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 AL139095.1-201ENST00000404326 391 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 RNU6ATAC-201ENST00000408749 126 ntBASIC4.51□□□□□ -1.69
HOXA2O43364 CYCSP19-201ENST00000411715 316 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms