Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3BM21 RNY4P6-201ENST00000363667 96 ntBASIC4.23□□□□□ -1.73
H3BM21 SNORA63D-201ENST00000364359 132 ntBASIC4.23□□□□□ -1.73
H3BM21 Y_RNA.290-201ENST00000364879 114 ntBASIC4.23□□□□□ -1.73
H3BM21 RNU1-100P-201ENST00000365255 165 ntBASIC4.23□□□□□ -1.73
H3BM21 AP002088.1-201ENST00000382740 395 ntBASIC4.23□□□□□ -1.73
H3BM21 SNORA37-201ENST00000384504 129 ntBASIC4.23□□□□□ -1.73
H3BM21 RNA5SP504-201ENST00000410676 117 ntBASIC4.23□□□□□ -1.73
H3BM21 AL139281.1-201ENST00000422120 335 ntBASIC4.23□□□□□ -1.73
H3BM21 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.23□□□□□ -1.73
H3BM21 RPL23AP46-201ENST00000438548 490 ntBASIC4.23□□□□□ -1.73
H3BM21 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.23□□□□□ -1.73
H3BM21 RNU6-344P-201ENST00000516635 111 ntBASIC4.23□□□□□ -1.73
H3BM21 RNU1-117P-201ENST00000517041 158 ntBASIC4.23□□□□□ -1.73
H3BM21 IGLV3-26-201ENST00000520756 302 ntBASIC4.23□□□□□ -1.73
H3BM21 AC100770.1-201ENST00000532310 322 ntBASIC4.23□□□□□ -1.73
H3BM21 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.23□□□□□ -1.73
H3BM21 AC090132.2-201ENST00000615881 347 ntBASIC4.23□□□□□ -1.73
H3BM21 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
H3BM21 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
H3BM21 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
H3BM21 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
H3BM21 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
H3BM21 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3BM21 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3BM21 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
H3BM21 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
H3BM21 AC106871.1-201ENST00000568324 3102 ntBASIC4.22□□□□□ -1.73
H3BM21 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3BM21 AC007256.1-201ENST00000392253 2765 ntBASIC4.22□□□□□ -1.73
H3BM21 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
H3BM21 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3BM21 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.22□□□□□ -1.73
H3BM21 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3BM21 Y_RNA.366-201ENST00000365540 102 ntBASIC4.22□□□□□ -1.73
H3BM21 AC004866.1-201ENST00000411748 78 ntBASIC4.22□□□□□ -1.73
H3BM21 AC007064.1-201ENST00000412238 351 ntBASIC4.22□□□□□ -1.73
H3BM21 AL157831.1-201ENST00000426134 473 ntBASIC4.22□□□□□ -1.73
H3BM21 AL365496.1-201ENST00000426885 215 ntBASIC4.22□□□□□ -1.73
H3BM21 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.22□□□□□ -1.73
H3BM21 Z75741.1-201ENST00000446793 314 ntBASIC4.22□□□□□ -1.73
H3BM21 RNA5SP236-201ENST00000516169 116 ntBASIC4.22□□□□□ -1.73
H3BM21 RNA5SP519-201ENST00000516480 119 ntBASIC4.22□□□□□ -1.73
H3BM21 CKS1BP7-201ENST00000522230 235 ntBASIC4.22□□□□□ -1.73
H3BM21 IGKV2D-19-201ENST00000523346 262 ntBASIC4.22□□□□□ -1.73
H3BM21 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.22□□□□□ -1.73
H3BM21 AC022254.1-201ENST00000567857 235 ntBASIC4.22□□□□□ -1.73
H3BM21 MIR4666B-201ENST00000578142 81 ntBASIC4.22□□□□□ -1.73
H3BM21 AC105245.1-201ENST00000581934 244 ntBASIC4.22□□□□□ -1.73
H3BM21 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.22□□□□□ -1.73
H3BM21 MIR92B-201ENST00000607575 96 ntBASIC4.22□□□□□ -1.73
H3BM21 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.22□□□□□ -1.73
H3BM21 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3BM21 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
H3BM21 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
H3BM21 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
H3BM21 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
H3BM21 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3BM21 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
H3BM21 ADAM3A-203ENST00000461344 2157 ntBASIC4.21□□□□□ -1.73
H3BM21 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
H3BM21 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
H3BM21 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
H3BM21 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3BM21 RNU6-674P-201ENST00000363831 107 ntBASIC4.21□□□□□ -1.74
H3BM21 RNU6-1240P-201ENST00000365155 104 ntBASIC4.21□□□□□ -1.74
H3BM21 RNU6-1323P-201ENST00000384025 107 ntBASIC4.21□□□□□ -1.74
H3BM21 Y_RNA.437-201ENST00000384113 113 ntBASIC4.21□□□□□ -1.74
H3BM21 PPIAP31-201ENST00000405422 495 ntBASIC4.21□□□□□ -1.74
H3BM21 RNA5SP239-201ENST00000410218 129 ntBASIC4.21□□□□□ -1.74
H3BM21 AL645939.1-201ENST00000453429 797 ntBASIC4.21□□□□□ -1.74
H3BM21 SNORD108-201ENST00000459332 71 ntBASIC4.21□□□□□ -1.74
H3BM21 RNU6-113P-201ENST00000516653 101 ntBASIC4.21□□□□□ -1.74
H3BM21 RNA5SP73-201ENST00000516744 108 ntBASIC4.21□□□□□ -1.74
H3BM21 AC106785.1-201ENST00000565935 262 ntBASIC4.21□□□□□ -1.74
H3BM21 MIR3921-201ENST00000577308 85 ntBASIC4.21□□□□□ -1.74
H3BM21 MIR4286-201ENST00000580651 93 ntBASIC4.21□□□□□ -1.74
H3BM21 AC053481.4-201ENST00000583164 216 ntBASIC4.21□□□□□ -1.74
H3BM21 AC136601.2-201ENST00000604356 474 ntBASIC4.21□□□□□ -1.74
H3BM21 MIR7154-201ENST00000620673 73 ntBASIC4.21□□□□□ -1.74
H3BM21 AC034229.5-201ENST00000624258 185 ntBASIC4.21□□□□□ -1.74
H3BM21 RNA5SP196-201ENST00000625967 102 ntBASIC4.21□□□□□ -1.74
H3BM21 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3BM21 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.21□□□□□ -1.74
H3BM21 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H3BM21 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
H3BM21 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
H3BM21 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3BM21 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3BM21 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.2□□□□□ -1.74
H3BM21 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H3BM21 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
H3BM21 RNU1-15P-201ENST00000353977 144 ntBASIC4.2□□□□□ -1.74
H3BM21 MIR448-201ENST00000362131 111 ntBASIC4.2□□□□□ -1.74
H3BM21 Y_RNA.124-201ENST00000363339 93 ntBASIC4.2□□□□□ -1.74
H3BM21 RNU6-414P-201ENST00000363705 104 ntBASIC4.2□□□□□ -1.74
H3BM21 MIR134-201ENST00000385258 73 ntBASIC4.2□□□□□ -1.74
H3BM21 SNORD66.1-201ENST00000391230 76 ntBASIC4.2□□□□□ -1.74
H3BM21 FTH1P15-201ENST00000406984 280 ntBASIC4.2□□□□□ -1.74
H3BM21 RPL27AP8-201ENST00000424277 446 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms