Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 RN7SKP49-201ENST00000516675 260 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 MIR5006-201ENST00000583027 110 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 AC078899.3-201ENST00000599065 212 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 MZT1P2-201ENST00000604387 248 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 BRDTP1-201ENST00000605735 677 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 U4.1-201ENST00000620349 87 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 AC080128.1-201ENST00000474389 1917 ntBASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC163A0A0D9SF12 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 RNU5F-3P-201ENST00000363767 117 ntBASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.183-201ENST00000363882 113 ntBASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 AL079342.1-201ENST00000401460 267 ntBASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 AL033519.2-201ENST00000403958 392 ntBASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 AL031121.1-201ENST00000406553 254 ntBASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 AC004386.2-201ENST00000441858 148 ntBASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-408P-201ENST00000515910 100 ntBASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 RNU2-44P-201ENST00000516795 194 ntBASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 AC023043.3-201ENST00000593113 385 ntBASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 AC069294.1-201ENST00000608397 350 ntBASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC163A0A0D9SF12 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 MTND5P35-201ENST00000557537 1720 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 RNU1-18P-201ENST00000363062 164 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 SNORA18.3-201ENST00000384122 132 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-611P-201ENST00000384276 104 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-505P-201ENST00000384427 107 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 RNU1-89P-201ENST00000384592 164 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 MIR29B2-201ENST00000385055 81 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 RNU2-25P-201ENST00000411041 191 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 AC092427.1-202ENST00000430569 476 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 AL731563.1-201ENST00000442202 214 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 PCNPP5-201ENST00000452246 481 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 AC023141.11-201ENST00000508864 202 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 MIR449C-201ENST00000516047 92 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-1143P-201ENST00000516125 104 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.713-201ENST00000517013 96 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-570P-201ENST00000517051 105 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 RRN3P3-201ENST00000549207 578 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 MIR7106-201ENST00000612419 65 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 AC005562.2-201ENST00000618264 111 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 MIR7157-201ENST00000635801 60 ntBASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CCDC163A0A0D9SF12 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC163A0A0D9SF12 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-793P-201ENST00000384233 104 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-1145P-201ENST00000384246 107 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 SNORA44-201ENST00000384584 132 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 AC098869.1-201ENST00000481627 292 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.683-201ENST00000516508 93 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 RNU1-117P-201ENST00000517041 158 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 RN7SKP40-201ENST00000517211 242 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-586P-201ENST00000517265 104 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 AC026333.2-201ENST00000542164 106 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 AC105245.1-201ENST00000581934 244 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 AL356575.1-201ENST00000603008 283 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 MIR486-1-201ENST00000612171 68 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 AC010329.5-201ENST00000623497 2174 ntBASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC163A0A0D9SF12 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.105-201ENST00000363182 111 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-702P-201ENST00000364982 107 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.452-201ENST00000384202 108 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-937P-201ENST00000384325 106 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 MIR1302-6-201ENST00000408466 90 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 UQCRBP2-201ENST00000447827 297 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 LINC01399-202ENST00000458450 244 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-107P-201ENST00000516643 102 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 AP003733.2-201ENST00000529409 171 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 AC022080.3-201ENST00000544433 482 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 MIR3117-201ENST00000584034 78 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 RPL12P50-201ENST00000603116 116 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 RNVU1-4-201ENST00000612985 164 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 MIR376A1-201ENST00000616574 68 ntBASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC163A0A0D9SF12 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms