Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RPL23AP52-201ENST00000439311 478 ntBASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 RPL34P20-201ENST00000442771 351 ntBASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR4666B-201ENST00000578142 81 ntBASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 HMGN2P15-201ENST00000585707 270 ntBASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 AC112200.1-201ENST00000625015 234 ntBASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
PCDHGA4Q9Y5G9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.84□□□□□ -1.64
PCDHGA4Q9Y5G9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.84□□□□□ -1.64
PCDHGA4Q9Y5G9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.84□□□□□ -1.64
PCDHGA4Q9Y5G9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 MIR448-201ENST00000362131 111 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-675P-201ENST00000384236 104 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 RPL21P3-201ENST00000395517 478 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 SDHCP2-201ENST00000398565 501 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 AC007738.1-201ENST00000413892 348 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 AL353689.1-201ENST00000438895 199 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 RPS29P9-201ENST00000440360 171 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 RNA5SP57-201ENST00000459463 123 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 RN7SL244P-201ENST00000493405 297 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 MRPS17P9-201ENST00000511924 393 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU7-61P-201ENST00000515897 61 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 AC091042.1-201ENST00000579213 173 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 MIR3667-201ENST00000581025 74 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU1-30P-201ENST00000606575 163 ntBASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
PCDHGA4Q9Y5G9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 Y_RNA.10-201ENST00000362371 110 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 Y_RNA.298-201ENST00000364960 107 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 Y_RNA.313-201ENST00000365095 103 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-979P-201ENST00000383896 107 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-975P-201ENST00000384296 105 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 RPS27P22-201ENST00000478056 241 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 RNA5SP43-201ENST00000516559 110 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 SUMO2P16-201ENST00000519475 264 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 MIR3163-201ENST00000581592 73 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 AC021443.1-201ENST00000604478 211 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 MIR6758-201ENST00000620653 63 ntBASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHGA4Q9Y5G9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 OR56B2P-202ENST00000641377 2453 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 SNORD32B-201ENST00000364460 84 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-1240P-201ENST00000365155 104 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU1-57P-201ENST00000384491 166 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 MIR147B-201ENST00000390185 80 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-816P-201ENST00000390914 107 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-1268P-201ENST00000391214 107 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-1239P-201ENST00000391310 107 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 AL451046.2-201ENST00000403074 277 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 TRAV8-5-201ENST00000537369 341 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 MIR5588-201ENST00000581890 63 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 MIR5197-201ENST00000583721 112 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 U7.3-201ENST00000616123 62 ntBASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA4Q9Y5G9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 AC000403.1-201ENST00000613696 3585 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 Y_RNA.437-201ENST00000384113 113 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 RPL30P4-201ENST00000429309 333 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 AL450023.3-201ENST00000440592 271 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 HMGN2P21-201ENST00000447764 270 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU7-14P-201ENST00000459331 62 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-693P-201ENST00000516134 107 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 IGKV1-32-201ENST00000519290 311 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 AC022655.2-201ENST00000577280 318 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 MIR5096-201ENST00000583713 70 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 AC096577.2-201ENST00000611455 153 ntBASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA4Q9Y5G9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms