Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU6-784P-201ENST00000384330 106 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 RNU6-331P-201ENST00000384724 107 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 AC138623.1-201ENST00000418060 216 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 SCARNA16.2-201ENST00000516520 172 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 AL158827.2-201ENST00000602494 330 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 AL080274.1-201ENST00000605565 220 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 AL691447.3-201ENST00000635020 330 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 Z75746.1-201ENST00000440243 2080 ntBASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 Y_RNA.123-201ENST00000363338 102 ntBASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 RNA5SP393-201ENST00000363423 117 ntBASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 RNU6-1141P-201ENST00000364520 107 ntBASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 AC005534.2-201ENST00000431047 433 ntBASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 RNA5SP384-201ENST00000516615 116 ntBASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 RPS15AP11-201ENST00000594193 385 ntBASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 AC016717.2-201ENST00000609089 5141 ntBASIC3.85□□□□□ -1.79
CDK11AQ9UQ88 SNORD114-19-201ENST00000363072 75 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 Y_RNA.197-201ENST00000364004 102 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 SNORD42.2-201ENST00000365570 69 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 RNU6-142P-201ENST00000384019 107 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 AC097463.2-201ENST00000421074 142 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 RPL39P29-201ENST00000447779 157 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 AL353705.4-201ENST00000449661 238 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 Y_RNA.639-201ENST00000458981 102 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 ELOCP31-201ENST00000540463 467 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 7SK.7-201ENST00000603504 247 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 AC103810.6-201ENST00000606708 136 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 AC134503.1-201ENST00000633048 54 ntBASIC3.84□□□□□ -1.79
CDK11AQ9UQ88 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.84□□□□□ -1.8
CDK11AQ9UQ88 Y_RNA.128-201ENST00000363391 112 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 RNU6-1227P-201ENST00000383981 107 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AC007064.1-201ENST00000412238 351 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 DPH3P2-201ENST00000422618 250 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 FO393415.2-201ENST00000480085 343 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AC068781.1-201ENST00000488231 618 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AC104564.1-201ENST00000493028 407 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 RNU6-470P-201ENST00000515954 104 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 RNU6-976P-201ENST00000516086 111 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AC109329.1-201ENST00000518744 317 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AC115990.1-201ENST00000526957 301 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AC079598.5-201ENST00000547460 117 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 MIR1273D-201ENST00000577266 86 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 MIR4524B-201ENST00000581569 115 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 MIR5092-201ENST00000583139 88 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 AC009318.2-201ENST00000610917 651 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 ZNF299P-201ENST00000406845 1804 ntBASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK11AQ9UQ88 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 RNU6-1010P-201ENST00000362757 107 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 RNU6-490P-201ENST00000362985 107 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 SNORD32A-201ENST00000364805 84 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 AL354751.2-201ENST00000415471 210 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 CYCSP48-201ENST00000417124 323 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 RPL23AP95-201ENST00000426806 265 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 AC078809.1-201ENST00000427601 140 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 AL031659.1-201ENST00000447075 539 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 SNRPGP7-201ENST00000469016 106 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 RPL30P12-201ENST00000474666 353 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 AC016632.1-201ENST00000503994 196 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 MIR5696-201ENST00000578474 85 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 AP006437.1-201ENST00000641440 3685 ntBASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK11AQ9UQ88 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 MIR369-201ENST00000362155 70 ntBASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 AL133475.1-201ENST00000404414 305 ntBASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 AC003685.2-201ENST00000422795 395 ntBASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 AC022493.2-201ENST00000506122 481 ntBASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 RNU6-1153P-201ENST00000516760 105 ntBASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 RNU1-104P-201ENST00000517280 175 ntBASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 AC016256.1-201ENST00000547971 354 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms