Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SNORD109A-201ENST00000459128 67 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 U8.22-201ENST00000459141 133 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 AC022493.1-201ENST00000492984 337 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 CKS1BP2-201ENST00000497342 240 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 PDCD5P2-201ENST00000507570 312 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 RNU7-175P-201ENST00000515915 61 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 SNORA31.3-201ENST00000516029 96 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 SNORA64.4-201ENST00000516632 81 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 RNU6-1315P-201ENST00000517187 99 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 MIR5701-3-201ENST00000578890 82 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 MIR5701-1-201ENST00000585138 82 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 AC011476.5-201ENST00000615594 130 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 MIR5701-2-201ENST00000615634 82 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 MIR6864-201ENST00000617935 70 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 RNU6-859P-201ENST00000362728 107 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.127-201ENST00000363386 109 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RNU6-151P-201ENST00000364158 107 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.383-201ENST00000383855 97 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RNU6-482P-201ENST00000391068 107 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RNU5A-5P-201ENST00000411054 116 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AC092809.3-201ENST00000415453 231 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AL513328.1-201ENST00000446460 224 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AC007395.1-201ENST00000451333 677 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RNU6-1211P-201ENST00000459179 105 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AC016065.2-201ENST00000514530 444 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RNU6-914P-201ENST00000516749 109 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 MIR4659A-201ENST00000580269 81 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AC004832.5-201ENST00000608677 401 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 MIR26A1-201ENST00000362205 77 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RNU6-818P-201ENST00000364837 108 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 SNORA36C-201ENST00000384289 132 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 MIR184-201ENST00000384962 84 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RNU6-257P-201ENST00000410238 98 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RN7SKP192-201ENST00000411291 327 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AL512844.2-201ENST00000433990 593 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 HSPE1P6-201ENST00000479457 291 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AC083906.5-201ENST00000503722 328 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RNA5SP272-201ENST00000516095 111 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RNU1-86P-201ENST00000516108 154 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 RNU1-107P-201ENST00000516617 154 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AC127455.1-201ENST00000565496 145 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 TUG1_2.1-201ENST00000614234 87 ntBASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.2□□□□□ -2.06
NOTCH3Q9UM47 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.534-201ENST00000384599 112 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.580-201ENST00000391004 95 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 BTF3L4P2-201ENST00000392798 346 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 UQCRBP2-201ENST00000447827 297 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 RPL7L1P1-201ENST00000448259 785 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 AL160314.1-201ENST00000490836 438 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 MIR4308-201ENST00000580634 81 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.123-201ENST00000363338 102 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 RNU4-84P-201ENST00000364200 139 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 RNU6-827P-201ENST00000365553 106 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 MIR764-201ENST00000390811 85 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 MIR190B-201ENST00000401119 79 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 AC096638.1-201ENST00000444678 216 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 AF186996.7-201ENST00000492781 209 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 RNU6-548P-201ENST00000517083 115 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 MIR3684-201ENST00000579779 74 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 AL355812.1-201ENST00000603215 216 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.778-201ENST00000620203 90 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 MIR4275-201ENST00000636486 87 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 AC092593.1-201ENST00000515413 1815 ntBASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
NOTCH3Q9UM47 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
NOTCH3Q9UM47 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms